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scnpilot_solids2_trim150_scaffold_492

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_492_1
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..219)
DNA (219bp) protein (73aa)
UPF0234 protein Namu_1006 n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XBF3_NAKMY
hypothetical protein; K09767 hypothetical protein
UPF0234 protein Namu_1006 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_492_trna_1
unknown

Not on your lists

397..477
DNA (81bp)
transferRNA Tyr
scnpilot_solids2_trim150_scaffold_492_2
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

630..1823
DNA (1194bp) protein (398aa)
Integrase family protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XES3_NAKMY
Integrase {ECO:0000313|EMBL:KGN39844.1}; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
integrase
scnpilot_solids2_trim150_scaffold_492_3
unknown

Not on your lists

comp(1772..1990)
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_492_4
unknown

Not on your lists

comp(2036..2533)
DNA (498bp) protein (166aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_492_5
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(2549..3547)
DNA (999bp) protein (333aa)
ribokinase; K00852 ribokinase [EC:2.7.1.15]
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036E1F83
Tax=RBG_16_RIF_CHLX_70_13_curated
scnpilot_solids2_trim150_scaffold_492_6

Not on your lists

3846..4304
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Streptomyces sp. LaPpAH-108 RepID=UPI000360926A
Uncharacterized protein {ECO:0000313|EMBL:KGA20237.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
transcriptional regulator, LacI family
scnpilot_solids2_trim150_scaffold_492_7
unknown

Not on your lists

comp(4508..4720)
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_492_8
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4844..6328
DNA (1485bp) protein (495aa)
Putative RNA-directed DNA polymerase {ECO:0000313|EMBL:CCM65197.1}; EC=2.7.7.49 {ECO:0000313|EMBL:CCM65197.1};; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
RNA-directed DNA polymerase (EC:2.7.7.49); K00986 RNA-directed DNA polymerase [EC:2.7.7.49] rbh
RNA-directed DNA polymerase n=1 Tax=Brevibacterium linens RepID=UPI0001BC2C37 rbh
scnpilot_solids2_trim150_scaffold_492_9
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6355..7035
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Streptomyces sp. LaPpAH-108 RepID=UPI000360926A
Uncharacterized protein {ECO:0000313|EMBL:ETK30782.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
scnpilot_solids2_trim150_scaffold_492_10
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7235..8380
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI0003738AC7 rbh
Sugar ABC transporter periplasmic sugar-binding protein {ECO:0000313|EMBL:EWM16562.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
sugar ABC transporter periplasmic sugar-binding protein; K10439 ribose transport system substrate-binding protein rbh
scnpilot_solids2_trim150_scaffold_492_11
unknown

Not on your lists

8416..8694
DNA (279bp) protein (93aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_492_12
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8642..9724
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=actinobacterium SCGC AAA278-I18 RepID=UPI000369302A rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:CDR14320.1}; TaxID=576784 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;"
ABC transporter permease
scnpilot_solids2_trim150_scaffold_492_13
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9721..10689
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=actinobacterium SCGC AAA278-I18 RepID=UPI00038151E1 rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:CDR14323.1}; TaxID=576784 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;"
ABC transporter permease
scnpilot_solids2_trim150_scaffold_492_14
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10686..12242
DNA (1557bp) protein (519aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00037DFC17 rbh
ABC transporter permease {ECO:0000313|EMBL:KKA36628.1}; TaxID=1354891 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
ABC transporter rbh
scnpilot_solids2_trim150_scaffold_492_15
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12255..12635
DNA (381bp) protein (127aa)
Strain NCTC 7096 contig_392, whole genome shotgun sequence {ECO:0000313|EMBL:KIV49822.1}; TaxID=47500 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneurinibacillus migulanus (Bacillus migulanus).;"
scnpilot_solids2_trim150_scaffold_492_16
Bacillaceae bacterium MTCC 8252, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12666..14978
DNA (2313bp) protein (771aa)
large subunit of N,N-dimethylformamidase; K03418 N,N-dimethylformamidase [EC:3.5.1.56] rbh
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AB-629-F11 RepID=UPI00037170A5 rbh
Large subunit of N,N-dimethylformamidase {ECO:0000313|EMBL:KKB35036.1}; TaxID=1123719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; unclassified Bacillaceae.;" source="Bacillaceae bacterium MTCC 8252.;"
scnpilot_solids2_trim150_scaffold_492_17
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15055..15507
DNA (453bp) protein (151aa)
transport protein RbsD/FucU; K02431 L-fucose mutarotase [EC:5.1.3.-]
RbsD or FucU transport n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7C7T7_STRBB
RbsD or FucU transport {ECO:0000313|EMBL:ADI12635.1}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
scnpilot_solids2_trim150_scaffold_492_18
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15558..16706)
DNA (1149bp) protein (383aa)
glycerate kinase; K00865 glycerate kinase [EC:2.7.1.31] rbh
glycerate kinase n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI000376C7E9 rbh
SPG23_c1, whole genome shotgun sequence {ECO:0000313|EMBL:KIS29244.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
scnpilot_solids2_trim150_scaffold_492_19
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16797..17840)
DNA (1044bp) protein (348aa)
Transcriptional regulator, LacI family n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CM60_DESK7
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AEG15214.1}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
scnpilot_solids2_trim150_scaffold_492_20
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(17874..18617)
DNA (744bp) protein (248aa)
Beta-lactamase domain-containing protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CPA9_DESK7
beta-lactamase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
scnpilot_solids2_trim150_scaffold_492_21
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18631..19383)
DNA (753bp) protein (251aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ARM7_STRRD
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACZ90367.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
scnpilot_solids2_trim150_scaffold_492_22
Streptomyces chromofuscus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19383..20624)
DNA (1242bp) protein (414aa)
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Streptomyces chromofuscus RepID=S5GA10_STRCW rbh
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000313|EMBL:AGQ56994.1}; TaxID=42881 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces chromofuscus.;"
glutamate-1-semialdehyde aminotransferase
scnpilot_solids2_trim150_scaffold_492_23
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20828..21760
DNA (933bp) protein (311aa)
3-ketoacyl-ACP reductase n=1 Tax=Rhodococcus opacus RepID=UPI00029CC52D rbh
Uncharacterized protein {ECO:0000313|EMBL:AHK35019.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
3-keto-5-aminohexanoate cleavage protein rbh
scnpilot_solids2_trim150_scaffold_492_24
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

21804..22754
DNA (951bp) protein (317aa)
Lipase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0X7_THERP
lipase
Lipase {ECO:0000313|EMBL:ACM04789.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
scnpilot_solids2_trim150_scaffold_492_25
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22856..24853
DNA (1998bp) protein (666aa)
acetoacetyl-CoA synthase; K01907 acetoacetyl-CoA synthetase [EC:6.2.1.16]
Acetoacetyl-CoA synthase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XK51_NAKMY
Acetoacetyl-CoA synthase {ECO:0000313|EMBL:ACV76734.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_492_26
unknown

Not on your lists

comp(25055..25192)
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_492_27
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25231..28332)
DNA (3102bp) protein (1034aa)
TrwC relaxase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XHE2_NAKMY
TrwC relaxase
TrwC relaxase {ECO:0000313|EMBL:ACV78348.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_492_28
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28450..28653
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Salinispora arenicola RepID=UPI000370D349
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW00202.1}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
scnpilot_solids2_trim150_scaffold_492_29
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28650..29048
DNA (399bp) protein (133aa)
PilT protein domain protein n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B520_FRADG
PilT protein domain-containing protein; K07062
PilT protein domain protein {ECO:0000313|EMBL:AEH11042.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
Displaying items 1-30 of 41 in total

View Taxonomy