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scnpilot_solids2_trim150_scaffold_511

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_511_1
unknown

Not on your lists

1..117
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_511_2
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

407..2041
DNA (1635bp) protein (545aa)
Capsular exopolysaccharide family n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CW95_TRURR rbh
capsular exopolysaccharide family protein rbh
Capsular exopolysaccharide family {ECO:0000313|EMBL:ADI16045.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
scnpilot_solids2_trim150_scaffold_511_3
Thermus thermophilus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(2065..3555)
DNA (1491bp) protein (497aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6) rbh
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:AEG33397.1}; EC=2.7.8.6 {ECO:0000313|EMBL:AEG33397.1};; TaxID=762633 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus thermophilus (strain SG0.5JP17-16).;"
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Thermus thermophilus (strain SG0.5JP17-16) RepID=F6DGN9_THETG rbh
scnpilot_solids2_trim150_scaffold_511_4
Prevotella sp. oral taxon 317, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3751..4122
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Prevotella sp. oral taxon 317 str. F0108 RepID=D3IGY1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFC69277.1}; TaxID=575615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella sp. oral taxon 317 str. F0108.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_511_5
unknown

Not on your lists

comp(4237..4461)
DNA (225bp) protein (75aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_511_6
unknown

Not on your lists

comp(4685..4822)
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_511_7
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5428..6210
DNA (783bp) protein (261aa)
Transcriptional regulator n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q0Z5_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:EKP94589.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
GntR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_511_8
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6203..7225
DNA (1023bp) protein (341aa)
D-ribose transporter subunit membrane component of ABC superfamily n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EWD8_9RHIZ rbh
D-ribose transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CDX23939.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
inner-membrane translocator
scnpilot_solids2_trim150_scaffold_511_9
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7329..8306
DNA (978bp) protein (326aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FFU6_9RHIZ rbh
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:CCV15241.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
periplasmic binding protein/LacI transcriptional regulator
scnpilot_solids2_trim150_scaffold_511_10
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8357..9883
DNA (1527bp) protein (509aa)
Ribose import ATP-binding protein RbsA {ECO:0000313|EMBL:CDX49088.1}; EC=3.6.3.17 {ECO:0000313|EMBL:CDX49088.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ribose import ATP-binding protein RbsA 1 (EC:3.6.3.17); K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
Ribose import ATP-binding protein rbsA 1 n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FDC3_9RHIZ rbh
scnpilot_solids2_trim150_scaffold_511_11
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9880..10824
DNA (945bp) protein (315aa)
ribokinase; K00852 ribokinase [EC:2.7.1.15] rbh
Phosphofructokinase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F8M8_9RHIZ rbh
Putative ribokinase {ECO:0000313|EMBL:CCV08256.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
scnpilot_solids2_trim150_scaffold_511_12
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10821..11282
DNA (462bp) protein (154aa)
ribose ABC transporter auxiliary component; K06726 D-ribose pyranase [EC:5.-.-.-]
Putative cytoplasmic sugar-binding protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EVK3_9RHIZ
Putative cytoplasmic sugar-binding protein {ECO:0000313|EMBL:CCV08257.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
scnpilot_solids2_trim150_scaffold_511_13
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11360..12067
DNA (708bp) protein (236aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=1300222 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus borstelensis AK1.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4); K01619 deoxyribose-phosphate aldolase [EC:4.1.2.4]
Deoxyribose-phosphate aldolase n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8DLY4_9BACL
scnpilot_solids2_trim150_scaffold_511_14
unknown

Not on your lists

comp(12406..12804)
DNA (399bp) protein (133aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_511_15
unknown

Not on your lists

comp(12948..13223)
DNA (276bp) protein (92aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_511_16
unknown

Not on your lists

13249..13677
DNA (429bp) protein (143aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_511_17
Thermus aquaticus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

13674..14249
DNA (576bp) protein (192aa)
Uncharacterized protein {ECO:0000313|EMBL:EED09495.1}; Flags: Precursor;; TaxID=498848 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus aquaticus Y51MC23.;"
scnpilot_solids2_trim150_scaffold_511_18
unknown

Not on your lists

14246..16117
DNA (1872bp) protein (624aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_511_19
R_WOR_2_68_15, WOR-2, Bacteria

Not on your lists

16118..17551
DNA (1434bp) protein (478aa)
putative transcriptional regulator (EC:3.6.1.-); K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] rbh
Putative transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJ52_CHLTF rbh
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
scnpilot_solids2_trim150_scaffold_511_20
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(17705..18703)
DNA (999bp) protein (333aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416; / KR-200).;"
GDP-L-fucose synthase n=1 Tax=Deinococcus aquatilis RepID=UPI0003757B23
nucleoside-diphosphate-sugar epimerase rbh
scnpilot_solids2_trim150_scaffold_511_21
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(18696..19742)
DNA (1047bp) protein (349aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] rbh
GDP-mannose 4,6-dehydratase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S1K9_THEOJ rbh
scnpilot_solids2_trim150_scaffold_511_22
Thermus aquaticus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(19802..20593)
DNA (792bp) protein (264aa)
WecB/TagA/CpsF family glycosyl transferase (EC:2.4.1.187); K05946 N-acetylglucosaminyldiphosphoundecaprenol [EC:2.4.1.187] rbh
UDP-N-acetyl-D-mannosaminuronic acid transferase n=1 Tax=Thermus islandicus RepID=UPI0003B6AA2F rbh
Glycosyl transferase, WecB/TagA/CpsF family {ECO:0000313|EMBL:EED09508.1}; TaxID=498848 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus aquaticus Y51MC23.;"
scnpilot_solids2_trim150_scaffold_511_23
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20697..21659
DNA (963bp) protein (321aa)
UDP-glucuronate decarboxylase {ECO:0000313|EMBL:EGV20639.1}; EC=4.1.1.35 {ECO:0000313|EMBL:EGV20639.1};; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
NAD-dependent epimerase/dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
UDP-glucuronate decarboxylase n=1 Tax=Thiocapsa marina 5811 RepID=F9U666_9GAMM rbh
scnpilot_solids2_trim150_scaffold_511_24
Deinococcus geothermalis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

21685..22989
DNA (1305bp) protein (435aa)
Membrane protein involved in the export of O-antigen and teichoic acid-like protein n=1 Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1J3J8_DEIGD rbh
O-antigen and teichoic acid-like export protein rbh
Membrane protein involved in the export of O-antigen and teichoic acid-like protein {ECO:0000313|EMBL:ABF43936.1}; TaxID=319795 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus geothermalis (strain DSM 11300).;"
scnpilot_solids2_trim150_scaffold_511_25
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22986..24134
DNA (1149bp) protein (383aa)
wcaL1; glycosyl transferase group 1 (EC:2.4.1.-)
Glycosyl transferase group 1 {ECO:0000313|EMBL:CCH02752.1}; EC=2.4.1.- {ECO:0000313|EMBL:CCH02752.1};; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
Glycosyl transferase group 1 n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KF49_9BACT
scnpilot_solids2_trim150_scaffold_511_26
Deinococcus geothermalis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

24131..25453
DNA (1323bp) protein (441aa)
dTMP kinase {ECO:0000256|SAAS:SAAS00031932}; EC=2.7.4.9 {ECO:0000256|SAAS:SAAS00031932};; TaxID=319795 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus geothermalis (strain DSM 11300).;"
Thymidylate kinase n=1 Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1J3J7_DEIGD
thymidylate kinase-like protein
scnpilot_solids2_trim150_scaffold_511_27
unknown

Not on your lists

25453..26550
DNA (1098bp) protein (366aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_511_28
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26547..27317
DNA (771bp) protein (257aa)
putative glycosyltransferase (EC:2.4.-.-)
Glycosyltransferase, group 2 family protein n=1 Tax=Prevotella multiformis DSM 16608 RepID=F0F782_9BACT
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
scnpilot_solids2_trim150_scaffold_511_29
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

27314..28570
DNA (1257bp) protein (419aa)
Glycosyltransferase n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KXS8_9SYNC rbh
glycosyltransferase rbh
Glycosyltransferase {ECO:0000313|EMBL:AFY76770.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
scnpilot_solids2_trim150_scaffold_511_30
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28595..30058
DNA (1464bp) protein (488aa)
O-antigen polymerase n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6WND9_9ALTE
O-antigen polymerase {ECO:0000313|EMBL:ENO12567.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter nanhaiticus D15-8W.;"
O-antigen polymerase
Displaying items 1-30 of 36 in total

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