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scnpilot_solids2_trim150_scaffold_512

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_512_1
Komagataeibacter xylinus, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138..530
DNA (393bp) protein (131aa)
Replication initiator {ECO:0000313|EMBL:GAO00955.1}; TaxID=1234668 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter xylinus NBRC 13693.;"
scnpilot_solids2_trim150_scaffold_512_2
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1615..2502)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii OR214 RepID=R0CDN3_RALPI rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ74760.1}; TaxID=1264675 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii OR214.;"
TrfA family protein rbh
scnpilot_solids2_trim150_scaffold_512_3
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2635..2994)
DNA (360bp) protein (120aa)
transcriptional regulator n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002377B1C
Uncharacterized protein {ECO:0000313|EMBL:EPZ14337.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_512_4
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3066..4247)
DNA (1182bp) protein (394aa)
Probable plasmid-partitioning protein ParB n=1 Tax=Xylella fastidiosa (strain 9a5c) RepID=PARB2_XYLFA rbh
plasmid replication/partition protein rbh
Probable plasmid-partitioning protein ParB; TaxID=160492 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa (strain 9a5c).;"
scnpilot_solids2_trim150_scaffold_512_5
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4244..5005)
DNA (762bp) protein (254aa)
plasmid replication protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002377B1E rbh
Plasmid replication protein {ECO:0000313|EMBL:EPZ14340.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
plasmid replication protein; K03496 chromosome partitioning protein rbh
scnpilot_solids2_trim150_scaffold_512_6
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5144..5494)
DNA (351bp) protein (117aa)
Single-stranded DNA-binding protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6V2_NITMU
single-strand binding protein; K03111 single-strand DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids2_trim150_scaffold_512_7
unknown

Not on your lists

comp(5744..6010)
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_512_8
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6317..7072
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZMA2_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ14622.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
conjugal transfer protein; K03194 type IV secretion system protein VirB1
scnpilot_solids2_trim150_scaffold_512_9
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7193..7501
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Xylella fastidiosa 6c RepID=V8K1R8_XYLFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAF85573.1}; TaxID=160492 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa (strain 9a5c).;"
scnpilot_solids2_trim150_scaffold_512_10
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7473..7802
DNA (330bp) protein (110aa)
conjugal transfer protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002377B21
Conjugal transfer protein {ECO:0000313|EMBL:EPZ14625.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
conjugal transfer protein; K03197 type IV secretion system protein VirB2
scnpilot_solids2_trim150_scaffold_512_11
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7804..8145
DNA (342bp) protein (114aa)
conjugal transfer protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002377B22
Conjugal transfer protein {ECO:0000313|EMBL:EPZ14626.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
conjugal transfer protein; K03198 type IV secretion system protein VirB3
scnpilot_solids2_trim150_scaffold_512_12
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8147..10609
DNA (2463bp) protein (821aa)
Type IV secretion protein n=1 Tax=Thauera terpenica 58Eu RepID=T0AVP6_9RHOO rbh
Type IV secretion protein {ECO:0000313|EMBL:EPZ14628.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
conjugal transfer protein; K03199 type IV secretion system protein VirB4 rbh
scnpilot_solids2_trim150_scaffold_512_13
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10606..11256
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0AP58_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ14629.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
conjugal transfer protein; K03200 type IV secretion system protein VirB5
scnpilot_solids2_trim150_scaffold_512_14
unknown

Not on your lists

11267..11491
DNA (225bp) protein (75aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_512_15
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11501..12553
DNA (1053bp) protein (351aa)
Conjugal transfer protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZJ99_9RHOO rbh
Conjugal transfer protein {ECO:0000313|EMBL:EPZ14631.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
conjugal transfer protein; K03201 type IV secretion system protein VirB6 rbh
scnpilot_solids2_trim150_scaffold_512_16
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12690..13106
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002378528
Uncharacterized protein {ECO:0000313|EMBL:EPZ14632.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
scnpilot_solids2_trim150_scaffold_512_17
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13103..13906
DNA (804bp) protein (268aa)
Conjugal transfer protein n=1 Tax=Thauera terpenica 58Eu RepID=T0AVP9_9RHOO rbh
Conjugal transfer protein {ECO:0000313|EMBL:EPZ14633.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
conjugal transfer protein; K03203 type IV secretion system protein VirB8 rbh
scnpilot_solids2_trim150_scaffold_512_18
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13909..14742
DNA (834bp) protein (278aa)
Conjugal transfer protein n=1 Tax=Thauera terpenica 58Eu RepID=T0AP61_9RHOO rbh
Conjugal transfer protein {ECO:0000313|EMBL:EPZ14634.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
conjugal transfer protein; K03204 type IV secretion system protein VirB9 rbh
scnpilot_solids2_trim150_scaffold_512_19
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14739..15947
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZBN6_9RHOO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPZ14635.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
conjugal transfer protein; K03195 type IV secretion system protein VirB10 rbh
scnpilot_solids2_trim150_scaffold_512_20
BJP_08E140C01_10KDA_Methylophilales_47_88, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15944..16960
DNA (1017bp) protein (339aa)
Conjugal transfer protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZJA3_9RHOO rbh
conjugal transfer protein; K03196 type IV secretion system protein VirB11 rbh
Tax=BJP_08E140C01_10KDA_Methylophilales_47_88
scnpilot_solids2_trim150_scaffold_512_21
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16932..19184
DNA (2253bp) protein (751aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZMB5_9RHOO rbh
conjugal transfer protein; K03205 type IV secretion system protein VirD4 rbh
Tax=RBG_16_Gallionellales_56_9_curated
scnpilot_solids2_trim150_scaffold_512_22
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19194..19961
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Xylella fastidiosa (strain 9a5c) RepID=Q9PHI8_XYLFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAF85586.1}; TaxID=160492 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa (strain 9a5c).;"
scnpilot_solids2_trim150_scaffold_512_23
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19958..20659
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0AP63_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ14639.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_512_24
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20781..22610)
DNA (1830bp) protein (610aa)
Uncharacterized protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QVE8_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:ETF03916.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_512_25
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22603..23097)
DNA (495bp) protein (165aa)
Threonine efflux protein n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KJP4_SIMAS
threonine efflux protein
Threonine efflux protein {ECO:0000313|EMBL:AFU99374.2}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 /; SA1).;"
scnpilot_solids2_trim150_scaffold_512_26
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23090..24085)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QY13_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:ETF03914.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_512_27
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24401..25570)
DNA (1170bp) protein (390aa)
Nickase n=1 Tax=Xylella fastidiosa (strain 9a5c) RepID=Q9PHG1_XYLFA rbh
nickase rbh
Nickase {ECO:0000313|EMBL:AAF85615.1}; TaxID=160492 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa (strain 9a5c).;"
scnpilot_solids2_trim150_scaffold_512_28
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25572..26099)
DNA (528bp) protein (176aa)
hypothetical protein, partial n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI00023757B1
Uncharacterized protein {ECO:0000313|EMBL:EPZ14402.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_512_29
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26545..26844
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZII3_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ14401.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_512_30
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26841..27545
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Xylella fastidiosa (strain 9a5c) RepID=Q9PHF8_XYLFA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAF85618.1}; TaxID=160492 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa (strain 9a5c).;"
Displaying items 1-30 of 39 in total

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