name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_solids2_trim150_scaffold_535_1
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(159..1280)
|
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
anmK; anhydro-N-acetylmuramic acid kinase; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
rbh
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YM26_9RHIZ
rbh
|
|
scnpilot_solids2_trim150_scaffold_535_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1356..3065)
|
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SPK3_NITWN
Enoyl-CoA hydratase {ECO:0000313|EMBL:KFC75484.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_535_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3082..3531)
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P620_9BRAD
TadE family protein {ECO:0000313|EMBL:KFC75483.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
TadE family protein
|
|
scnpilot_solids2_trim150_scaffold_535_4
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3775..4743
|
Enoyl-CoA hydratase {ECO:0000313|EMBL:ESR23866.1}; EC=4.2.1.17 {ECO:0000313|EMBL:ESR23866.1};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000370F7F2
enoyl-CoA hydratase/isomerase; K13816 DSF synthase
|
|
scnpilot_solids2_trim150_scaffold_535_5
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4765..7329)
|
multi-sensor hybrid histidine kinase; K10715 two-component system, sensor histidine kinase RpfC [EC:2.7.13.3]
rbh
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RKT1_9RHIZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:ESR23865.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
|
|
scnpilot_solids2_trim150_scaffold_535_6
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7337..9472)
|
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RER0_9RHIZ
rbh
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) {ECO:0000313|EMBL:ESR23864.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
rbh
|
|
scnpilot_solids2_trim150_scaffold_535_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9691..10782)
|
Sulfate/thiosulfate import ATP-binding protein CysA {ECO:0000256|HAMAP-Rule:MF_01701}; EC=3.6.3.25 {ECO:0000256|HAMAP-Rule:MF_01701};; Sulfate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01701}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
sulfate ABC transporter ATPase; K02045 sulfate transport system ATP-binding protein [EC:3.6.3.25]
rbh
sulfate ABC transporter ATP-binding protein n=1 Tax=Xanthobacteraceae RepID=UPI0003662331
rbh
|
|
scnpilot_solids2_trim150_scaffold_535_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10796..11656)
|
UPI0003CF89A7 related cluster n=1 Tax=unknown RepID=UPI0003CF89A7
Sulfate ABC transporter, permease protein CysW {ECO:0000313|EMBL:KFC61556.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
sulfate ABC transporter permease; K02047 sulfate transport system permease protein
|
|
scnpilot_solids2_trim150_scaffold_535_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11649..12494)
|
Sulfate ABC transporter, inner membrane subunit CysT n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUV6_PARL1
Sulfate ABC transporter, inner membrane subunit CysT {ECO:0000313|EMBL:KFC61557.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
sulfate ABC transporter permease; K02046 sulfate transport system permease protein
|
|
scnpilot_solids2_trim150_scaffold_535_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12499..13545)
|
sulfate transporter subunit n=1 Tax=Methyloferula stellata RepID=UPI00037879AE
rbh
Sulfate ABC transporter, periplasmic sulfate-binding protein {ECO:0000313|EMBL:KFC61558.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
sulfate ABC transporter substrate-binding protein; K02048 sulfate transport system substrate-binding protein
rbh
|
|
scnpilot_solids2_trim150_scaffold_535_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13763..14917
|
Putative FAD dependent oxidoreductase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TYP0_9PROT
rbh
Putative FAD dependent oxidoreductase {ECO:0000313|EMBL:KFC70951.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glycine/D-amino acid oxidase, deaminating
|
|
scnpilot_solids2_trim150_scaffold_535_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14942..15274
|
Putative oxidoreductase n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A3I0_9ACTN
Agropine synthesis reductase {ECO:0000313|EMBL:KFC70952.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative oxidoreductase
|
|
scnpilot_solids2_trim150_scaffold_535_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15271..15654
|
Uncharacterized protein n=1 Tax=Rhizobium radiobacter RepID=K7WN37_RHIRD
Agropine synthesis reductase {ECO:0000313|EMBL:KFC70952.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
short-chain dehydrogenase
|
|
scnpilot_solids2_trim150_scaffold_535_14
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15719..17266
|
Extracellular solute-binding protein, family 5 n=1 Tax=alpha proteobacterium BAL199 RepID=A8TYN2_9PROT
rbh
Extracellular solute-binding protein, family 5 {ECO:0000313|EMBL:EDP62476.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
putative extracellular solute-binding protein, family 5 precursor
rbh
|
|
scnpilot_solids2_trim150_scaffold_535_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17319..18257
|
Binding-protein-dependent transport systems inner membrane component n=1 Tax=alpha proteobacterium BAL199 RepID=A8TYN0_9PROT
rbh
Putative peptide transporter permease subunit: membrane component of ABC superfamily protein {ECO:0000313|EMBL:KFC70954.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
peptide ABC transporter permease; K02033 peptide/nickel transport system permease protein
rbh
|
|
scnpilot_solids2_trim150_scaffold_535_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18254..19144
|
Binding-protein-dependent transport systems inner membrane component n=1 Tax=alpha proteobacterium BAL199 RepID=A8TYM8_9PROT
rbh
Dipeptide transporter membrane component of ABC superfamily protein {ECO:0000313|EMBL:KFC70955.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein
rbh
|
|
scnpilot_solids2_trim150_scaffold_535_17
bacterium YEK0313, Bacteria
|
Not on your lists |
19147..20964
|
ABC transporter related n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M5V1_METRJ
rbh
Glutathione import ATP-binding protein GsiA {ECO:0000313|EMBL:CEJ14830.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ABC transporter-like protein
rbh
|
|
scnpilot_solids2_trim150_scaffold_535_18
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21145..22596)
|
Aldehyde dehydrogenase NAD-linked {ECO:0000313|EMBL:CAL75445.1}; EC=1.2.1.3 {ECO:0000313|EMBL:CAL75445.1};; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
aldehyde dehydrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031DD017
rbh
|
|
scnpilot_solids2_trim150_scaffold_535_19
R_Acidobacteria_65_29, Acidobacteria, Bacteria
|
Not on your lists |
comp(22731..25460)
|
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI0003648053
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
|
|
scnpilot_solids2_trim150_scaffold_535_20
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25578..26276)
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NR16_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:AHY56064.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
branched-chain amino acid ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
|
|
scnpilot_solids2_trim150_scaffold_535_21
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26273..28126)
|
ABC transporter related n=2 Tax=Oligotropha carboxidovorans RepID=B6JAW1_OLICO
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein; K01998 branched-chain amino acid transport system permease protein
ABC transporter, putative high-affinity branched-chain amino acid transport ATP-binding protein LivG {ECO:0000313|EMBL:AEI07739.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
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|
scnpilot_solids2_trim150_scaffold_535_22
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28140..29015)
|
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJL6_NITHX
rbh
inner-membrane translocator
rbh
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:ABE63581.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
|
|
scnpilot_solids2_trim150_scaffold_535_23
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29055..30404)
|
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJL5_NITHX
rbh
twin-arginine translocation pathway signal
rbh
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:ABE63582.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
|
|
scnpilot_solids2_trim150_scaffold_535_24
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30579..33983)
|
CaiC protein {ECO:0000313|EMBL:BAQ43587.1}; EC=6.2.1.20 {ECO:0000313|EMBL:BAQ43587.1};; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
acylglycerophosphoethanolamine acyltransferase; K05939 acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
rbh
acylglycerophosphoethanolamine acyltransferase n=1 Tax=Methylobacterium sp. 77 RepID=UPI000364517D
rbh
|
|
scnpilot_solids2_trim150_scaffold_535_25
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34267..34863
|
Transcriptional regulator, TetR family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ICZ1_METNO
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACL59383.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
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