name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_solids2_trim150_scaffold_542_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..1448)
|
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E80878
rbh
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit {ECO:0000313|EMBL:KFC66860.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
|
|
scnpilot_solids2_trim150_scaffold_542_2
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1778..2266)
|
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI00036166F8
MarR protein {ECO:0000313|EMBL:BAQ49036.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
TrmB family transcriptional regulator
|
|
scnpilot_solids2_trim150_scaffold_542_3
bacterium YEK0313, Bacteria
|
Not on your lists |
2418..4046
|
AMP-dependent synthetase and ligase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IBK9_METNO
rbh
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CEJ10310.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
|
|
scnpilot_solids2_trim150_scaffold_542_4
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4250..5023
|
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F14ACE
Uncharacterized protein {ECO:0000313|EMBL:KFG69828.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_542_5
unknown
|
Not on your lists |
comp(5269..5580)
|
This feature has no annotations |
|
scnpilot_solids2_trim150_scaffold_542_6
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5740..6252
|
AsnC family transcriptional regulator n=2 Tax=Rhodospirillum rubrum RepID=G2T8Q8_RHORU
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ABC23703.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
|
|
scnpilot_solids2_trim150_scaffold_542_7
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6427..7338)
|
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EDEC8E
rbh
beta-lactamase domain-containing protein
rbh
Beta-lactamase domain protein {ECO:0000313|EMBL:ACA17170.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
|
|
scnpilot_solids2_trim150_scaffold_542_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7478..8089
|
biotin biosynthesis protein BioY n=1 Tax=gamma proteobacterium HIMB30 RepID=UPI000262C999
BioY protein {ECO:0000313|EMBL:KFC66847.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
BioY protein; K03523 putative biotin biosynthesis protein BioY
|
|
scnpilot_solids2_trim150_scaffold_542_9
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8171..9316)
|
GTP cyclohydrolase II {ECO:0000256|SAAS:SAAS00129532}; EC=3.5.4.25 {ECO:0000256|SAAS:SAAS00129532};; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000380BD89
rbh
|
|
scnpilot_solids2_trim150_scaffold_542_10
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9464..10186
|
Bifunctional deaminase-reductase domain protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7AAZ1_STAND
bifunctional deaminase-reductase domain-containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:ADH91008.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
|
|
scnpilot_solids2_trim150_scaffold_542_11
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10311..11753)
|
FAD/FMN-dependent dehydrogenase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYJ5_9RHIZ
rbh
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:EIM29037.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
FAD linked oxidase domain-containing protein
rbh
|
|
scnpilot_solids2_trim150_scaffold_542_12
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11764..13593)
|
glucosyl transferase family 2 n=1 Tax=Xanthobacteraceae RepID=UPI000377AFA7
rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADH91002.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
|
|
scnpilot_solids2_trim150_scaffold_542_13
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13695..14702
|
dehydrogenase n=1 Tax=Xanthobacteraceae RepID=UPI0003751C93
rbh
alcohol dehydrogenase zinc-binding domain-containing protein
rbh
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ADH91003.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
|
|
scnpilot_solids2_trim150_scaffold_542_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14689..15090
|
6-pyruvoyl tetrahydropterin synthase n=1 Tax=Xanthobacteraceae RepID=UPI000375D899
Queuosine biosynthesis protein QueD {ECO:0000313|EMBL:KFC66719.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_542_15
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15087..16136
|
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00037B8425
rbh
group 1 glycosyl transferase
rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADH91005.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
|
|
scnpilot_solids2_trim150_scaffold_542_16
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16214..17266
|
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UD08_RHIRD
rbh
Uncharacterized protein {ECO:0000313|EMBL:EGP55336.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
hypothetical protein
rbh
|
|
scnpilot_solids2_trim150_scaffold_542_17
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17342..18154)
|
Probable short-chain dehydrogenase (Fragment) n=1 Tax=Bordetella bronchiseptica Bbr77 RepID=K4T1Z4_BORBO
rbh
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:KCV60223.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
short-chain dehydrogenase
rbh
|
|
scnpilot_solids2_trim150_scaffold_542_18
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18179..19261)
|
Uncharacterized protein n=3 Tax=Bordetella RepID=K0M887_BORPB
rbh
hypothetical protein
rbh
CoA-transferase family III protein {ECO:0000313|EMBL:KCV60227.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
|
|
scnpilot_solids2_trim150_scaffold_542_19
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19264..20598)
|
Coenzyme A ligase n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QLS0_BORBO
rbh
coenzyme A ligase
rbh
AMP-binding enzyme {ECO:0000313|EMBL:KCV60246.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
|
|
scnpilot_solids2_trim150_scaffold_542_20
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20595..21242)
|
TetR-family transcriptional regulator n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QM80_BORBO
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KCV60237.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
|
|
scnpilot_solids2_trim150_scaffold_542_21
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21242..22432)
|
Putative acyl-CoA dehyrdogenase n=3 Tax=Bordetella bronchiseptica RepID=K0MDM6_BORBM
rbh
acyl-CoA dehyrdogenase
rbh
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:KDD58800.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
|
|
scnpilot_solids2_trim150_scaffold_542_22
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22447..23439)
|
Branched-chain amino acid ABC transporter,permease protein n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QMA6_BORBO
rbh
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:KDD58805.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
branched-chain amino acid ABC transporter permease
rbh
|
|
scnpilot_solids2_trim150_scaffold_542_23
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23439..24305)
|
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Bordetella bronchiseptica 1289 RepID=K4TYN5_BORBO
rbh
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:KCB44031.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
branched-chain amino acid ABC transporter permease
rbh
|
|
scnpilot_solids2_trim150_scaffold_542_24
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24302..25045)
|
Branched-chain amino acid ABC transporter,ATP-binding protein n=3 Tax=Bordetella bronchiseptica RepID=K4QLR6_BORBO
rbh
branched-chain amino acid ABC transporter ATP-binding protein
rbh
Branched-chain amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CCN21532.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
|
|
scnpilot_solids2_trim150_scaffold_542_25
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25042..25818)
|
Putative ABC transporter ATP-binding protein n=1 Tax=Bordetella bronchiseptica D445 RepID=K4TIG7_BORBO
rbh
Branched-chain amino acid ABC transporter {ECO:0000313|EMBL:KCV60275.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
ABC transporter ATP-binding protein
rbh
|
|
scnpilot_solids2_trim150_scaffold_542_26
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25916..27085)
|
Branched-chain amino acid ABC transporter, binding protein n=1 Tax=Bordetella bronchiseptica 1289 RepID=K4TXX0_BORBO
rbh
branched-chain amino acid ABC transporter substrate-binding protein
rbh
Branched-chain amino acid ABC transporter, binding protein {ECO:0000313|EMBL:CCN21534.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
|
|
scnpilot_solids2_trim150_scaffold_542_27
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27391..27777
|
Uncharacterized protein n=4 Tax=Bordetella RepID=K0MAL6_BORPB
PF01796 domain protein {ECO:0000313|EMBL:KCV60251.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
hypothetical protein; K07068
|
|
scnpilot_solids2_trim150_scaffold_542_28
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27774..28922
|
Putative thiolase n=3 Tax=Bordetella bronchiseptica RepID=K4QM72_BORBO
rbh
Thiolase, C-terminal domain protein {ECO:0000313|EMBL:KCB44301.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
thiolase
rbh
|
|
scnpilot_solids2_trim150_scaffold_542_29
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28948..29886
|
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0FY79_9BURK
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EOA06403.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;"
short-chain dehydrogenase/reductase sdr
|
|
scnpilot_solids2_trim150_scaffold_542_30
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29898..30761
|
Putative hydratase n=1 Tax=Bordetella bronchiseptica Bbr77 RepID=K4T9W6_BORBO
rbh
MaoC-like protein {ECO:0000313|EMBL:KCV60267.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
hydratase
rbh
|