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scnpilot_solids2_trim150_scaffold_545

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_545_1
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138..974)
DNA (837bp) protein (279aa)
Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei Pasteur 52237 RepID=A8HKP3_BURPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR29149.1}; TaxID=626418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae (strain BGR1).;"
scnpilot_solids2_trim150_scaffold_545_2
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1062..1511)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Paracoccus sp. TRP RepID=UPI000225FBE0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM39172.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
scnpilot_solids2_trim150_scaffold_545_3
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1601..2938)
DNA (1338bp) protein (446aa)
Phage phi-C31 major capsid gp36-like protein n=1 Tax=Rhizobium sp. RepID=L0NCT7_RHISP
Phage phi-C31 major capsid gp36-like protein {ECO:0000313|EMBL:CCF18621.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
HK97 family phage major capsid protein
scnpilot_solids2_trim150_scaffold_545_4

Not on your lists

comp(2935..3690)
DNA (756bp) protein (252aa)
pro-head protease n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4F70
Uncharacterized protein {ECO:0000313|EMBL:KKL11527.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
phage prohead protease, HK97 family; K06904
scnpilot_solids2_trim150_scaffold_545_5
unknown

Not on your lists

comp(3690..3941)
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_545_6

Not on your lists

comp(3938..4756)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Marinomonas phage P12026 RepID=I6R1H0_9VIRU
Uncharacterized protein {ECO:0000313|EMBL:AFM54851.1}; TaxID=1176423 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA phages.;" source="Marinomonas phage P12026.;"
phage mu protein f
scnpilot_solids2_trim150_scaffold_545_7
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4740..6068)
DNA (1329bp) protein (443aa)
Phage portal protein, HK97 family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRJ3_PARL1
HK97 family phage portal protein
Phage portal protein, HK97 family {ECO:0000313|EMBL:ABS62526.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids2_trim150_scaffold_545_8
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6069..7643)
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U745_9RHIZ
Terminase {ECO:0000313|EMBL:KEA07132.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
large terminase subunit
scnpilot_solids2_trim150_scaffold_545_9
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7657..8169)
DNA (513bp) protein (171aa)
Uncharacterized protein n=4 Tax=Escherichia RepID=D7YE13_ECOLX
Haemophilus influenzae strain RMHi93 ctg7180000001659, whole genome shotgun sequence {ECO:0000313|EMBL:KIP50102.1}; TaxID=727 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae.;"
terminase small subunit
scnpilot_solids2_trim150_scaffold_545_10
unknown

Not on your lists

comp(8660..9247)
DNA (588bp) protein (196aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_545_11
unknown

Not on your lists

comp(9244..9780)
DNA (537bp) protein (179aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_545_12
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9773..10882)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46YN8_CUPPJ
Uncharacterized protein {ECO:0000313|EMBL:KDR41562.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_545_13
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10879..12306)
DNA (1428bp) protein (476aa)
dnaB; replicative DNA helicase (EC:3.6.1.-); K02314 replicative DNA helicase [EC:3.6.4.12]
Replicative DNA helicase n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KT61_MICAA
Tax=CG_Alphaprot_01
scnpilot_solids2_trim150_scaffold_545_14
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12303..13934)
DNA (1632bp) protein (544aa)
C-5 cytosine-specific DNA methylase; K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]
C-5 cytosine-specific DNA methylase n=1 Tax=Rhizobium sp. RepID=L0NFJ6_RHISP rbh
Putative C-5 cytosine-specific DNA methylase {ECO:0000313|EMBL:KGJ69995.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
scnpilot_solids2_trim150_scaffold_545_15
unknown

Not on your lists

comp(13931..14122)
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_545_16
unknown

Not on your lists

comp(14119..14325)
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_545_17

Not on your lists

comp(14322..14927)
DNA (606bp) protein (202aa)
MT-A70 family protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BWU4_NITHN
Uncharacterized protein {ECO:0000313|EMBL:KKM78249.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
MT-A70 family protein
scnpilot_solids2_trim150_scaffold_545_18
Parvularcula bermudensis, Parvularcula, Parvularculales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14924..15391)
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) RepID=E0TGB5_PARBH
hypothetical protein; K13583 GcrA cell cycle regulator
Uncharacterized protein {ECO:0000313|EMBL:ADM09158.1}; TaxID=314260 species="Bacteria; Proteobacteria; Alphaproteobacteria; Parvularculales; Parvularculaceae; Parvularcula.;" source="Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC; 12087).;"
scnpilot_solids2_trim150_scaffold_545_19
unknown

Not on your lists

comp(15687..16226)
DNA (540bp) protein (180aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_545_20
unknown

Not on your lists

comp(16248..16943)
DNA (696bp) protein (232aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_545_21
unknown

Not on your lists

comp(16946..17227)
DNA (282bp) protein (94aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_545_22
unknown

Not on your lists

comp(17230..17721)
DNA (492bp) protein (164aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_545_23
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17718..18071)
DNA (354bp) protein (118aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobacter.;" source="Thalassobacter sp. 16PALIMAR09.;"
LexA repressor (EC:3.4.21.88)
LexA family transcriptional regulator n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0AB7
scnpilot_solids2_trim150_scaffold_545_24
unknown

Not on your lists

comp(18065..18358)
DNA (294bp) protein (98aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_545_25
unknown

Not on your lists

18455..18727
DNA (273bp) protein (91aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_545_26
unknown

Not on your lists

18813..19055
DNA (243bp) protein (81aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_545_27
unknown

Not on your lists

19104..19793
DNA (690bp) protein (230aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_545_28
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19678..19908)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Sinorhizobium meliloti (strain AK83) RepID=F6DYV5_SINMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDP50684.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
scnpilot_solids2_trim150_scaffold_545_29
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20027..20689
DNA (663bp) protein (221aa)
Transcriptional regulator n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U201_9PROT
Transcriptional regulator {ECO:0000313|EMBL:KGJ22904.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
S24 family peptidase
scnpilot_solids2_trim150_scaffold_545_30
unknown

Not on your lists

20698..21105
DNA (408bp) protein (136aa)

This feature has no annotations

Displaying items 1-30 of 55 in total

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