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scnpilot_solids2_trim150_scaffold_546

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_546_1
Xenococcus sp. PCC 7305, Xenococcus, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

1..600
DNA (600bp) protein (200aa)
Putative esterase of the alpha-beta hydrolase superfamily n=1 Tax=Xenococcus sp. PCC 7305 RepID=L8M258_9CYAN
Putative esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:ELS02362.1}; TaxID=102125 species="Bacteria; Cyanobacteria; Pleurocapsales; Xenococcus.;" source="Xenococcus sp. PCC 7305.;"
patatin domain-containing protein
scnpilot_solids2_trim150_scaffold_546_2
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

628..2580
DNA (1953bp) protein (651aa)
Uncharacterized protein n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B1M9_FRADG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEH08001.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
scnpilot_solids2_trim150_scaffold_546_3
Xenococcus sp. PCC 7305, Xenococcus, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

2559..4244
DNA (1686bp) protein (562aa)
hypothetical protein; K03333 cholesterol oxidase [EC:1.1.3.6]
Choline dehydrogenase-like flavoprotein n=1 Tax=Xenococcus sp. PCC 7305 RepID=L8M1Z4_9CYAN rbh
Choline dehydrogenase-like flavoprotein {ECO:0000313|EMBL:ELS02366.1}; TaxID=102125 species="Bacteria; Cyanobacteria; Pleurocapsales; Xenococcus.;" source="Xenococcus sp. PCC 7305.;"
scnpilot_solids2_trim150_scaffold_546_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4337..4549)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL50_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87941.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_546_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4559..4951)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL49_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87940.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
pspC; DNA-binding transcriptional activator of psp operon
scnpilot_solids2_trim150_scaffold_546_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4955..5227)
DNA (273bp) protein (91aa)
DNA-binding transcriptional activator of psp operon n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL48_9GAMM
DNA-binding transcriptional activator of psp operon {ECO:0000313|EMBL:EIL87939.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
pspC; DNA-binding transcriptional activator of psp operon
scnpilot_solids2_trim150_scaffold_546_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5224..5445)
DNA (222bp) protein (74aa)
DNA-binding transcriptional regulator of psp operon n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL47_9GAMM
DNA-binding transcriptional regulator of psp operon {ECO:0000313|EMBL:EIL87938.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
pspB; DNA-binding transcriptional regulator of psp operon
scnpilot_solids2_trim150_scaffold_546_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5452..6132)
DNA (681bp) protein (227aa)
Phage shock protein A, PspA n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL46_9GAMM
Phage shock protein A, PspA {ECO:0000313|EMBL:EIL87937.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
pspA; phage shock protein A; K03969 phage shock protein A
scnpilot_solids2_trim150_scaffold_546_9
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6368..7417
DNA (1050bp) protein (350aa)
Psp operon transcriptional activator PspF n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL45_9GAMM
Psp operon transcriptional activator PspF {ECO:0000313|EMBL:EIL87936.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
pspF; Psp operon transcriptional activator; K03974 psp operon transcriptional activator
scnpilot_solids2_trim150_scaffold_546_10
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7635..8969
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI00030FF050 rbh
Hydrolase {ECO:0000313|EMBL:AIF48953.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
amidohydrolase rbh
scnpilot_solids2_trim150_scaffold_546_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9069..10016
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTT9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL90630.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_546_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10261..12183)
DNA (1923bp) protein (641aa)
Putative protease with the C-terminal PDZ domain n=1 Tax=Rhodanobacter sp. 115 RepID=I4WMP9_9GAMM rbh
Putative protease with the C-terminal PDZ domain {ECO:0000313|EMBL:EIM00741.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
glycyl aminopeptidase
scnpilot_solids2_trim150_scaffold_546_13
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12454..13515)
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0002D8D4B7
Aldo/keto reductase {ECO:0000313|EMBL:EHK59078.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_546_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13512..13862)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0002EBB5D3
Variovorax paradoxus strain MEDvA23 contig_83, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ22548.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_546_15
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13862..15160)
DNA (1299bp) protein (433aa)
Major facilitator superfamily (MFS) transporter n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13HD2_BURXL
major facilitator transporter
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids2_trim150_scaffold_546_16

Not on your lists

comp(15292..15918)
DNA (627bp) protein (209aa)
Cytochrome c family protein n=1 Tax=mine drainage metagenome RepID=T1BCC9_9ZZZZ
Cytochrome c family protein {ECO:0000313|EMBL:EQD70571.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ketosteroid isomerase-like enzyme
scnpilot_solids2_trim150_scaffold_546_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16127..17158)
DNA (1032bp) protein (344aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIA5_9GAMM rbh
nucleoside-diphosphate-sugar epimerase rbh
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AGG89403.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_546_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17357..18562
DNA (1206bp) protein (402aa)
Putative reductase UUA_05142 {ECO:0000256|HAMAP-Rule:MF_01838}; EC=1.3.1.- {ECO:0000256|HAMAP-Rule:MF_01838};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Putative reductase UUA_05142 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP46_9GAMM
putative paraquat-inducible protein B
scnpilot_solids2_trim150_scaffold_546_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18603..19364
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRI8_9GAMM
putative nucleotidyltransferase
Putative nucleotidyltransferase {ECO:0000313|EMBL:AGG87247.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_546_20
unknown

Not on your lists

19517..19819
DNA (303bp) protein (101aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_546_21

Not on your lists

19816..20229
DNA (414bp) protein (138aa)
Ribonuclease VapC n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C2P0_DELAS
Marine sediment metagenome DNA, contig: S01H1_L02295 {ECO:0000313|EMBL:GAF73286.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PilT domain-containing protein; K07062
scnpilot_solids2_trim150_scaffold_546_22
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20471..23200
DNA (2730bp) protein (910aa)
Type III restriction-modification enzyme helicase subunit n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIT0_THIDA rbh
type III restriction-modification enzyme helicase subunit rbh
Type III restriction-modification enzyme helicase subunit {ECO:0000313|EMBL:AAZ97445.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_solids2_trim150_scaffold_546_23
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23749..24039
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00035E04D3
Uncharacterized protein {ECO:0000313|EMBL:KIO50264.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
excinuclease ABC subunit C; K07461 putative endonuclease
scnpilot_solids2_trim150_scaffold_546_24
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24362..26746
DNA (2385bp) protein (795aa)
DNA methylase N-4/N-6 (EC:2.1.1.72) rbh
DNA methylase N-4/N-6 {ECO:0000313|EMBL:CCG08791.1}; EC=2.1.1.72 {ECO:0000313|EMBL:CCG08791.1};; TaxID=1150469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospirillum photometricum DSM 122.;"
DNA methylase N-4/N-6 n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SLC6_RHOPH rbh
scnpilot_solids2_trim150_scaffold_546_25
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26909..27811
DNA (903bp) protein (301aa)
twin-arginine translocation pathway signal protein (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] rbh
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036F843D
Uncharacterized protein {ECO:0000313|EMBL:KFN47549.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
scnpilot_solids2_trim150_scaffold_546_26
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27827..28222)
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=I2BQE9_PSEFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKA85285.1}; VapC_1 protein {ECO:0000313|EMBL:KIR23202.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
scnpilot_solids2_trim150_scaffold_546_27
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28219..28467)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82UW7_NITEU
Uncharacterized protein {ECO:0000313|EMBL:BAO30883.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_546_28
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28689..29477)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0U5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93086.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative methyltransferase
scnpilot_solids2_trim150_scaffold_546_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29526..30938)
DNA (1413bp) protein (471aa)
Short chain fatty acid transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WVU5_9GAMM
short chain fatty acids transporter
Short chain fatty acids transporter {ECO:0000313|EMBL:AGG90385.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_546_30
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31023..31862)
DNA (840bp) protein (280aa)
Putative DMT superfamily transporter inner membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W279_9GAMM
DMT(drug/metabolite transporter) superfamily permease
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Displaying items 1-30 of 33 in total

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