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scnpilot_solids2_trim150_scaffold_551

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_551_1
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..610
DNA (609bp) protein (203aa)
Uncharacterized protein {ECO:0000313|EMBL:AKE58954.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
Glycosyl hydrolase family 88 id=4152272 bin=GWC2_Ignavibacteria_56_12 species=Sphingobacterium sp. genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hypothetical protein
scnpilot_solids2_trim150_scaffold_551_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

600..1415
DNA (816bp) protein (272aa)
Transcriptional regulator, IclR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYA6_PSEUX
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AEA24728.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
scnpilot_solids2_trim150_scaffold_551_3
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1738..2691
DNA (954bp) protein (318aa)
Putative aliphatic sulfonates-binding protein n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SLJ8_ACTS5
Putative aliphatic sulfonates-binding protein
Putative aliphatic sulfonates-binding protein {ECO:0000313|EMBL:AEV83248.1}; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
scnpilot_solids2_trim150_scaffold_551_4
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2811..3608
DNA (798bp) protein (266aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JZJ1_ARTS2
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABK04461.1}; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
scnpilot_solids2_trim150_scaffold_551_5
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3619..4386
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI0003701987
Nitrate ABC transporter permease {ECO:0000313|EMBL:KDS87173.1}; TaxID=1906 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
Bicarbonate transport system permease protein cmpB
scnpilot_solids2_trim150_scaffold_551_6
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4428..5240
DNA (813bp) protein (271aa)
ABC transporter n=1 Tax=Nonomuraea coxensis RepID=UPI000362E86B rbh
ABC transporter {ECO:0000313|EMBL:KFF95840.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein rbh
scnpilot_solids2_trim150_scaffold_551_7
unknown

Not on your lists

comp(5407..6006)
DNA (600bp) protein (200aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_551_8
unknown

Not on your lists

comp(6118..6342)
DNA (225bp) protein (75aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_551_9
Mesorhizobium sp. LNJC386A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7179..7667)
DNA (489bp) protein (163aa)
UPI0003CF5248 related cluster n=1 Tax=unknown RepID=UPI0003CF5248
Membrane protein {ECO:0000313|EMBL:ESY35600.1}; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_551_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8041..8958)
DNA (918bp) protein (306aa)
Transcriptional regulator, IclR family n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21D39_RHOPB rbh
IclR family transcriptional regulator rbh
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ABD85697.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
scnpilot_solids2_trim150_scaffold_551_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9085..10023
DNA (939bp) protein (313aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21D40_RHOPB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD85696.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
scnpilot_solids2_trim150_scaffold_551_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10062..10967
DNA (906bp) protein (302aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21D41_RHOPB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD85695.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
scnpilot_solids2_trim150_scaffold_551_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10984..11754
DNA (771bp) protein (257aa)
HpcH/HpaI aldolase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21D42_RHOPB rbh
HpcH/HpaI aldolase rbh
HpcH/HpaI aldolase {ECO:0000313|EMBL:ABD85694.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
scnpilot_solids2_trim150_scaffold_551_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11877..13016
DNA (1140bp) protein (380aa)
Extracellular ligand-binding receptor n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21D43_RHOPB
Extracellular ligand-binding receptor {ECO:0000313|EMBL:KFC75880.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
extracellular ligand-binding receptor
scnpilot_solids2_trim150_scaffold_551_15
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13092..14150
DNA (1059bp) protein (353aa)
Malate/L-lactate dehydrogenase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11JG3_MESSB rbh
malate/L-lactate dehydrogenase rbh
Malate/L-lactate dehydrogenase {ECO:0000313|EMBL:ABG62462.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_551_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14164..14931
DNA (768bp) protein (256aa)
ABC transporter related n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21D44_RHOPB
ABC transporter related protein {ECO:0000313|EMBL:KFC75879.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter-like protein
scnpilot_solids2_trim150_scaffold_551_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14924..15946
DNA (1023bp) protein (341aa)
Inner-membrane translocator n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21D45_RHOPB
Inner-membrane translocator {ECO:0000313|EMBL:KFC75878.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
inner-membrane translocator
scnpilot_solids2_trim150_scaffold_551_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15939..16736
DNA (798bp) protein (266aa)
ABC transporter related n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21D46_RHOPB
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABD85690.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
scnpilot_solids2_trim150_scaffold_551_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16733..17608
DNA (876bp) protein (292aa)
Inner-membrane translocator n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21D47_RHOPB
Inner-membrane translocator {ECO:0000313|EMBL:KFC75876.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
inner-membrane translocator
scnpilot_solids2_trim150_scaffold_551_20
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17668..18477)
DNA (810bp) protein (270aa)
IclR helix-turn-helix protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZW68_9PROT
IclR helix-turn-helix protein {ECO:0000313|EMBL:EHM02711.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
IclR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_551_21
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18622..19569
DNA (948bp) protein (316aa)
Phosphoglycerate dehydrogenase and related dehydrogenase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNQ0_9BURK
Phosphoglycerate dehydrogenase and related dehydrogenase {ECO:0000313|EMBL:EGJ09968.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
phosphoglycerate dehydrogenase and related dehydrogenase
scnpilot_solids2_trim150_scaffold_551_22
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19566..20453
DNA (888bp) protein (296aa)
2-pyrone-4,6-dicarboxylate hydrolase n=1 Tax=Burkholderia bryophila RepID=UPI000375CE83
Amidohydrolase {ECO:0000313|EMBL:AJK47014.1}; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae PG1.;"
amidohydrolase 2
scnpilot_solids2_trim150_scaffold_551_23
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20450..20779
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MCS0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF18555.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
scnpilot_solids2_trim150_scaffold_551_24
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20790..21971
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B540C7
Uncharacterized protein {ECO:0000313|EMBL:AKH98820.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_551_25
unknown

Not on your lists

comp(22163..22492)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035C5341
scnpilot_solids2_trim150_scaffold_551_26
Brucella inopinata, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22622..22987)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035C5341
Lipooligosaccharide biosynthesis protein lic2B {ECO:0000313|EMBL:EFM56811.1}; TaxID=470735 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella inopinata BO1.;"
glycosyltransferase; K07270 glycosyl transferase, family 25
scnpilot_solids2_trim150_scaffold_551_27
Rhizobium phage 16-3, Caudovirales, Viruses

Not on your lists

comp(23968..25182)
DNA (1215bp) protein (405aa)
Int n=1 Tax=Rhizobium phage 16-3 RepID=B4UTU2_BP163 rbh
Int {ECO:0000313|EMBL:ABF71305.1}; TaxID=10704 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Rhizobium phage 16-3 (Bacteriophage 16-3).;"
integrase rbh
scnpilot_solids2_trim150_scaffold_551_28
unknown

Not on your lists

25233..25517
DNA (285bp) protein (95aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_551_29
unknown

Not on your lists

comp(25702..26097)
DNA (396bp) protein (132aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_551_30
unknown

Not on your lists

comp(26090..26482)
DNA (393bp) protein (131aa)

This feature has no annotations

Displaying items 1-30 of 37 in total

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