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scnpilot_solids2_trim150_scaffold_552

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_552_1
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2..724)
DNA (723bp) protein (241aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J0L9_CYCMS
DegT/DnrJ/EryC1/StrS aminotransferase
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:AEL23935.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids2_trim150_scaffold_552_2
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(756..2507)
DNA (1752bp) protein (584aa)
RagB/SusD domain protein id=5011312 bin=GWA2_Bacteroidetes_42_15 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes rbh
RagB/SusD domain-containing protein rbh
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids2_trim150_scaffold_552_3
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2526..5969)
DNA (3444bp) protein (1148aa)
TonB-dependent receptor plug id=2175358 bin=GWE2_Bacteroidetes_42_39 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
TonB-dependent receptor plug
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids2_trim150_scaffold_552_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6219..7382)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036D5FD5
Uncharacterized protein {ECO:0000313|EMBL:KIC95908.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
anti-FecI sigma factor FecR
scnpilot_solids2_trim150_scaffold_552_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7450..8043)
DNA (594bp) protein (198aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7R6_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW03360.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_552_6
Algibacter lectus, Algibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8074..9255
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037794B2 rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:GAL62735.1}; TaxID=221126 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Algibacter.;" source="Algibacter lectus.;"
LacI family transcriptional regulator; K05499 LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
scnpilot_solids2_trim150_scaffold_552_7
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9299..10495)
DNA (1197bp) protein (399aa)
Exo-alpha-sialidase; K01186 sialidase-1 [EC:3.2.1.18]
Exo-alpha-sialidase {ECO:0000313|EMBL:ACT94235.1}; EC=3.2.1.18 {ECO:0000313|EMBL:ACT94235.1};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
Exo-alpha-sialidase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W5L7_DYAFD
scnpilot_solids2_trim150_scaffold_552_8
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10629..11807)
DNA (1179bp) protein (393aa)
N-acylglucosamine 2-epimerase (EC:5.1.3.8); K01787 N-acylglucosamine 2-epimerase [EC:5.1.3.8]
N-acylglucosamine 2-epimerase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y403_PEDHD
N-acylglucosamine 2-epimerase {ECO:0000313|EMBL:KIA85703.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
scnpilot_solids2_trim150_scaffold_552_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11910..12848)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037A94C6
Uncharacterized protein {ECO:0000313|EMBL:KIC92787.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein; K07071
scnpilot_solids2_trim150_scaffold_552_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13306..14628
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036FC872
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03560.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_552_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14872..15852
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE13_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03561.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_552_12
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15894..16565
DNA (672bp) protein (224aa)
phosphoribosylformylglycinamidine synthase I; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] rbh
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064601}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064588};; Formylglycinamide ribonucleotide amidotransferase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; Glutaminase PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; TaxID=485918 species=
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036655F3 rbh
scnpilot_solids2_trim150_scaffold_552_13
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16644..17216)
DNA (573bp) protein (191aa)
RNA polymerase, sigma subunit, ECF family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE18_NIAKG
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:GAO44916.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
RNA polymerase, sigma subunit, ECF family; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_solids2_trim150_scaffold_552_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17475..20324
DNA (2850bp) protein (950aa)
Excinuclease ABC, A subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE19_NIAKG
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A
scnpilot_solids2_trim150_scaffold_552_15
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20377..21258)
DNA (882bp) protein (294aa)
Peptidase M56 BlaR1 n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J3I9_CYCMS
peptidase M56 BlaR1
Peptidase M56 BlaR1 {ECO:0000313|EMBL:AEL24628.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids2_trim150_scaffold_552_16
unknown

Not on your lists

comp(21301..21747)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003765750
hypothetical protein
scnpilot_solids2_trim150_scaffold_552_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21890..23164
DNA (1275bp) protein (425aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQG6_NIAKG
scnpilot_solids2_trim150_scaffold_552_trna_1
unknown

Not on your lists

23189..23275
DNA (87bp)
transferRNA Ser
scnpilot_solids2_trim150_scaffold_552_18
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23345..24004)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:754 RepID=R6DZ96_9BACE
Uncharacterized protein {ECO:0000313|EMBL:AHW61314.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_552_19
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23968..24276)
DNA (309bp) protein (103aa)
Uncharacterized protein id=3979517 bin=GWF2_Bacteroidetes_42_66 species=Indibacter alkaliphilus genus=Indibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids2_trim150_scaffold_552_20
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24563..25072
DNA (510bp) protein (170aa)
DinB family protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VW51_DYAFD
DinB family protein
DinB family protein {ECO:0000313|EMBL:ACT93183.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_552_21
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25247..26458)
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037C0E4A rbh
Sodium:proton exchanger {ECO:0000313|EMBL:KIA96864.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
sodium/hydrogen exchanger rbh
scnpilot_solids2_trim150_scaffold_552_22
unknown

Not on your lists

comp(26433..26612)
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_552_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27034..27879
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003621004 rbh
6-phosphogluconate dehydrogenase rbh
6-phosphogluconate dehydrogenase NAD-binding protein {ECO:0000313|EMBL:AEW02382.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_552_24
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27919..28383)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000381783A
Glycoside hydrolase family 13 {ECO:0000313|EMBL:KIC89958.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_552_25
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


28706..30514
DNA (1809bp) protein (603aa)
aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12]
aspartyl-tRNA synthetase n=1 Tax=Segetibacter koreensis RepID=UPI000376A418
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_552_26
unknown

Not on your lists

30642..30845
DNA (204bp) protein (68aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_552_27
Capnocytophaga cynodegmi, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30879..31331)
DNA (453bp) protein (151aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; D-aminoacyl-tRNA deacylase {ECO:0000256|SAAS:SAAS00160054}; D-tyrosyl-tRNA(Tyr) deacylase 1 {ECO:0000256|SAAS:SAAS00160048}; Probable D-tyrosyl-tRNA(Tyr) deacylase {ECO:0000256|SAAS:SAAS00160053}; Probable D-tyrosyl-tRNA(Tyr) deacylase 2 {ECO:0000256|SAAS:SAAS00160044}; TaxID=28189 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; C
dtd; D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-); K07560 D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-]
Dtd protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SYS2_9FLAO
scnpilot_solids2_trim150_scaffold_552_28
R_Deltaproteobacteria_44_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31646..33847
DNA (2202bp) protein (734aa)
ribonucleoside-diphosphate reductase class II; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Niabella aurantiaca RepID=UPI00036F1187
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_16_curated
Displaying 29 items

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