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scnpilot_solids2_trim150_scaffold_571

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_571_1

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comp(1105..1467)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium RepID=Q93DU9_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAK56382.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_571_2
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1630..1809
DNA (180bp) protein (60aa)
Transposase IS3/IS911 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9H2_NITMU
transposase IS3/IS911
Transposase IS3/IS911 {ECO:0000313|EMBL:ABB74599.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids2_trim150_scaffold_571_3
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2347..3117)
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IGK6_9SPHN rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCA91272.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
scnpilot_solids2_trim150_scaffold_571_4
Bordetella avium, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3118..3630)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C1AF
hypothetical protein
Hypothetical phage protein {ECO:0000313|EMBL:CAJ47970.1}; TaxID=360910 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella avium (strain 197N).;"
scnpilot_solids2_trim150_scaffold_571_5
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4185..4814
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZAS8_9RHOO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPZ14390.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
resolvase domain-containing protein
scnpilot_solids2_trim150_scaffold_571_6
unknown

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4816..5166
DNA (351bp) protein (117aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_571_7
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5199..6224
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XN11_9XANT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCF70591.1}; TaxID=1085630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. punicae str. LMG 859.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_571_8
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7361..7831
DNA (471bp) protein (157aa)
Probable Co/Zn/Cd efflux system membrane fusion protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGW2_9PROT
Probable Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:CCU62521.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
copper binding periplasmic protein cusF
scnpilot_solids2_trim150_scaffold_571_9
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7859..9235
DNA (1377bp) protein (459aa)
Outer membrane efflux protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y960_NITMU rbh
Outer membrane efflux protein rbh
Outer membrane efflux protein {ECO:0000313|EMBL:ABB74711.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids2_trim150_scaffold_571_10
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9232..10842
DNA (1611bp) protein (537aa)
Secretion protein HlyD n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y961_NITMU rbh
secretion protein HlyD; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB rbh
Secretion protein HlyD {ECO:0000313|EMBL:ABB74710.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids2_trim150_scaffold_571_11
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10844..13987
DNA (3144bp) protein (1048aa)
Heavy metal efflux pump CzcA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y962_NITMU
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:ABB74709.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
heavy metal efflux pump CzcA; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA
scnpilot_solids2_trim150_scaffold_571_12
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14128..14475
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DSZ5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO48689.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_571_13
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14569..14859
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HPK6_ACHXA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP14691.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
scnpilot_solids2_trim150_scaffold_571_14
Halomonas sp. A3H3, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14934..15824
DNA (891bp) protein (297aa)
dihydrodipicolinate synthase n=1 Tax=Halomonas lutea RepID=UPI00035F73FA
Uncharacterized protein {ECO:0000313|EMBL:CDG53169.1}; TaxID=1346287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. A3H3.;"
dapA; dihydrodipicolinate synthase
scnpilot_solids2_trim150_scaffold_571_15
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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16226..16558
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VSZ5_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids2_trim150_scaffold_571_16
unknown

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16603..16830
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_571_17
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16827..17384)
DNA (558bp) protein (186aa)
Resolvase domain protein n=5 Tax=Proteobacteria RepID=C5T7N6_ACIDE rbh
Uncharacterized protein {ECO:0000313|EMBL:EWF57016.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
resolvase rbh
scnpilot_solids2_trim150_scaffold_571_18
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(17391..17765)
DNA (375bp) protein (125aa)
Uncharacterized protein id=1700078 bin=GWB2_Deltaproteobacteria_65_81 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=GWA2_Deltaproteobacteria_65_63_curated
scnpilot_solids2_trim150_scaffold_571_19
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17762..17992)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHH0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62009.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_571_20
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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18156..20993
DNA (2838bp) protein (946aa)
Transposase n=1 Tax=Aeromonas molluscorum 848 RepID=R1F8D5_9GAMM
Transposase {ECO:0000313|EMBL:AKE69954.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
TnpA transposase
scnpilot_solids2_trim150_scaffold_571_21
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21138..21602
DNA (465bp) protein (155aa)
Lead, cadmium, zinc and mercury transporting ATPase Copper-translocating P-type ATPase {ECO:0000313|EMBL:CCU62526.1}; EC=3.6.3.3 {ECO:0000313|EMBL:CCU62526.1};; EC=3.6.3.4 {ECO:0000313|EMBL:CCU62526.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
copper-translocating P-type ATPase (EC:3.6.3.4)
Lead, cadmium, zinc and mercury transporting ATPase Copper-translocating P-type ATPase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGW6_9PROT
scnpilot_solids2_trim150_scaffold_571_22
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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21880..23748
DNA (1869bp) protein (623aa)
Multicopper oxidase type 1 n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82XJ1_NITEU
Multicopper oxidase type 1 {ECO:0000313|EMBL:CAD84190.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298).;"
pcoA; multicopper oxidase type 1
scnpilot_solids2_trim150_scaffold_571_23
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23745..24557
DNA (813bp) protein (271aa)
Copper resistance B n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AJ75_NITEC rbh
copper resistance B precursor; K07233 copper resistance protein B rbh
Copper resistance B {ECO:0000313|EMBL:ABI58596.1}; Flags: Precursor;; TaxID=335283 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eutropha (strain C91).;"
scnpilot_solids2_trim150_scaffold_571_24
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25077..27182
DNA (2106bp) protein (702aa)
Heavy metal translocating P-type ATPase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7H1_NITMU rbh
heavy metal translocating P-type ATPase rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ABB75300.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids2_trim150_scaffold_571_25
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27409..28314
DNA (906bp) protein (302aa)
carbonate dehydratase (EC:4.2.1.1); K01674 carbonic anhydrase [EC:4.2.1.1]
Carbonate dehydratase {ECO:0000313|EMBL:ABB73773.1}; EC=4.2.1.1 {ECO:0000313|EMBL:ABB73773.1};; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Carbonate dehydratase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBU8_NITMU
scnpilot_solids2_trim150_scaffold_571_26
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(28690..28902)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM55 RepID=J3B1H5_9PSED
Uncharacterized protein {ECO:0000313|EMBL:KJK23988.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_571_27
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28910..29188)
DNA (279bp) protein (93aa)
mercury transporter n=1 Tax=Bordetella sp. FB-8 RepID=UPI00038244FB
merP; Mercuric transport protein periplasmic component precursor (Periplasmic mercury ion-binding protein) (Mercury scavenger protein)
Periplasmic mercury ion-binding protein {ECO:0000256|RuleBase:RU361212}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
scnpilot_solids2_trim150_scaffold_571_28
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(29205..29417)
DNA (213bp) protein (71aa)
Mercuric transport protein n=36 Tax=Pseudomonas RepID=A4VQ09_PSEU5
mercuric transport protein; K08363 mercuric ion transport protein
Mercury transporter MerT {ECO:0000313|EMBL:KJX44419.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
scnpilot_solids2_trim150_scaffold_571_29
Enterobacter sp. 35699, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29629..30024
DNA (396bp) protein (132aa)
transcriptional regulator n=1 Tax=Pseudomonas stutzeri RepID=UPI000311B311
MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:KJN16519.1}; TaxID=1619248 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35699.;"
scnpilot_solids2_trim150_scaffold_571_30
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(30538..31095)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036231F1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH79900.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
Displaying items 1-30 of 32 in total

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