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scnpilot_solids2_trim150_scaffold_573

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_573_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1073)
DNA (1071bp) protein (357aa)
Response regulator receiver protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQS5_9GAMM
PEP-CTERM-box response regulator transcription factor
PEP-CTERM-box response regulator transcription factor {ECO:0000313|EMBL:AGG90130.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_573_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1070..3154)
DNA (2085bp) protein (695aa)
Putative PEP-CTERM system histidine kinase n=1 Tax=Rhodanobacter denitrificans RepID=M4NGV6_9GAMM
putative PEP-CTERM system histidine kinase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_573_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3216..4385)
DNA (1170bp) protein (390aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRV8_9GAMM
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EIM02200.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
UDP-N-acetylglucosamine 2-epimerase
scnpilot_solids2_trim150_scaffold_573_4

Not on your lists

comp(4544..5254)
DNA (711bp) protein (237aa)
Phosphoesterase, PA-phosphatase n=1 Tax=mine drainage metagenome RepID=T1A835_9ZZZZ
Phosphoesterase, PA-phosphatase {ECO:0000313|EMBL:EQD53137.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative phosphatase
scnpilot_solids2_trim150_scaffold_573_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5575..5769)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQS7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90132.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_573_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5766..6461)
DNA (696bp) protein (232aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|SAAS:SAAS00093350};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Phosphatidylserine decarboxylase-like protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQS8_9GAMM
phosphatidylserine decarboxylase
scnpilot_solids2_trim150_scaffold_573_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6678..7079
DNA (402bp) protein (134aa)
Transposase IS4 family protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKI6_9GAMM
Transposase IS4 family protein {ECO:0000313|EMBL:EIL87727.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
DDE-type transposase
scnpilot_solids2_trim150_scaffold_573_8
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7113..8129
DNA (1017bp) protein (339aa)
Glycosyl transferase family 2 n=1 Tax=uncultured bacterium RepID=K2DZV4_9BACT
Glycosyl transferase family 2 {ECO:0000313|EMBL:AJP48817.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
family 2 glycosyl transferase
scnpilot_solids2_trim150_scaffold_573_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8216..9268)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D139_9BACT
Uncharacterized protein {ECO:0000313|EMBL:GAO26548.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_573_10
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9265..10254)
DNA (990bp) protein (330aa)
Polysaccharide deacetylase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G691_ALIDK
Uncharacterized protein {ECO:0000313|EMBL:AJP48824.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
polysaccharide deacetylase
scnpilot_solids2_trim150_scaffold_573_11
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10568..11788)
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035ED30B
Uncharacterized protein {ECO:0000313|EMBL:AJP48816.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
scnpilot_solids2_trim150_scaffold_573_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11911..13350)
DNA (1440bp) protein (480aa)
Polysaccharide biosynthesis protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRU6_9GAMM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EIM02188.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
membrane protein involved in the export of O-antigen and teichoic acid
scnpilot_solids2_trim150_scaffold_573_13
unknown

Not on your lists

comp(13894..15702)
DNA (1809bp) protein (603aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_573_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15879..16739)
DNA (861bp) protein (287aa)
Uncharacterized protein n=2 Tax=Rhodanobacter denitrificans RepID=M4NRF2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90136.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_573_15
unknown

Not on your lists

comp(16838..17173)
DNA (336bp) protein (112aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_573_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17112..18842)
DNA (1731bp) protein (577aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQT0_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG90135.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_573_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19035..20132)
DNA (1098bp) protein (366aa)
DegT/DnrJ/EryC1/StrS aminotransferase; K13017 UDP-3-keto-D-GlcNAcA aminotransferase [EC:2.6.1.-]
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CVC7_VARPS
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:ACS18576.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
scnpilot_solids2_trim150_scaffold_573_18
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20125..20715)
DNA (591bp) protein (197aa)
Acetyltransferase n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4X278_PSEDE rbh
acetyltransferase rbh
Acetyltransferase {ECO:0000313|EMBL:AGI26513.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas denitrificans ATCC 13867.;"
scnpilot_solids2_trim150_scaffold_573_19
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20725..21678)
DNA (954bp) protein (318aa)
oxidoreductase family, NAD-binding Rossmann fold family protein; K13016 UDP-D-GlcNAcA oxidase [EC:1.1.1.-]
oxidoreductase n=1 Tax=Oligella ureolytica RepID=UPI00035FD795 rbh
Oxidoreductase {ECO:0000313|EMBL:KGY27816.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
scnpilot_solids2_trim150_scaffold_573_20
Pseudomonas sp. 10-1B, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21983..23077)
DNA (1095bp) protein (365aa)
bplD; UDP-N-acetylglucosamine 2-epimerase; K13019 UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
UDP-N-acetylglucosamine 2-epimerase n=2 Tax=Bordetella holmesii RepID=M5NM38_9BORD
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:KIY41315.1}; TaxID=1546029 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 10-1B.;"
scnpilot_solids2_trim150_scaffold_573_21
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23074..24183)
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00035F1595 rbh
group 1 glycosyl transferase
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_573_22

Not on your lists

comp(24239..25543)
DNA (1305bp) protein (435aa)
Glycosyl transferase, group 1 n=2 Tax=mine drainage metagenome RepID=T1CK55_9ZZZZ
Glycosyl transferase, group 1 {ECO:0000313|EMBL:EQD68360.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_573_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25540..26856)
DNA (1317bp) protein (439aa)
Putative O-glycosylation ligase, exosortase system type 1-associated n=1 Tax=Rhodanobacter denitrificans RepID=I4WQT8_9GAMM
putative O-glycosylation ligase, exosortase system type 1-associated
Putative O-glycosylation ligase, exosortase system type 1-associated {ECO:0000313|EMBL:AGG90143.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_573_24
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26849..27976)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NGX2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90144.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_573_25
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27973..29178)
DNA (1206bp) protein (402aa)
ATPase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRU1_9GAMM
ATPase {ECO:0000313|EMBL:EIM02183.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative ATP-grasp enzyme
scnpilot_solids2_trim150_scaffold_573_26
unknown

Not on your lists

comp(29178..29318)
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_573_27
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29315..30637)
DNA (1323bp) protein (441aa)
Glycosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQU2_9GAMM
glycosyltransferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_573_28
unknown

Not on your lists

comp(30634..30846)
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_573_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30843..32798)
DNA (1956bp) protein (652aa)
Asparagine synthetase n=1 Tax=Rhodanobacter denitrificans RepID=M4NKE3_9GAMM
asparagine synthase, glutamine-hydrolyzing
Asparagine synthase, glutamine-hydrolyzing {ECO:0000313|EMBL:AGG90148.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_573_30
unknown

Not on your lists

comp(32803..32946)
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying 30 items

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