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scnpilot_solids2_trim150_scaffold_576

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_576_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..600)
DNA (600bp) protein (200aa)
60 kDa chaperonin n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TBW1_MESCW
chaperonin GroEL; K04077 chaperonin GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
scnpilot_solids2_trim150_scaffold_576_2
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(652..966)
DNA (315bp) protein (105aa)
10 kDa chaperonin 2 n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=CH102_RHILO
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
groES; co-chaperonin GroES; K04078 chaperonin GroES
scnpilot_solids2_trim150_scaffold_576_3
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1297..1638
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YFF9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX22203.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_576_4
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1660..1938
DNA (279bp) protein (93aa)
UPI0003D06AEA related cluster n=1 Tax=unknown RepID=UPI0003D06AEA
Protein usg {ECO:0000313|EMBL:ESZ18751.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
Usg family protein
scnpilot_solids2_trim150_scaffold_576_5
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1922..2254)
DNA (333bp) protein (111aa)
UPI0003CE9EC7 related cluster n=1 Tax=unknown RepID=UPI0003CE9EC7
Uncharacterized protein {ECO:0000313|EMBL:CDX22201.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_576_6
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2382..2600)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00035D8E23
hypothetical protein
Msr2388 protein {ECO:0000313|EMBL:BAB49532.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
scnpilot_solids2_trim150_scaffold_576_7
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2828..3304
DNA (477bp) protein (159aa)
Small heat shock protein hspD n=3 Tax=Ochrobactrum intermedium RepID=C4WQV9_9RHIZ
Heat shock chaperone {ECO:0000313|EMBL:CDX61758.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hspB2; small heat shock protein HspB; K04080 molecular chaperone IbpA
scnpilot_solids2_trim150_scaffold_576_8
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3401..3910
DNA (510bp) protein (170aa)
molecular chaperone Hsp20 n=1 Tax=Rhizobium mongolense RepID=UPI0003B4CA3F
Small heat shock protein HspB {ECO:0000313|EMBL:ELT49278.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
heat shock protein Hsp20; K13993 HSP20 family protein
scnpilot_solids2_trim150_scaffold_576_9
unknown

Not on your lists

comp(4931..5065)
DNA (135bp) protein (45aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_576_10
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5135..5575)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037D88B8
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:KKB10013.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
small conductance mechanosensitive ion channel (MscS) family protein; K16053 miniconductance mechanosensitive channel
scnpilot_solids2_trim150_scaffold_576_11
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5726..5920)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037D88B8
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:KKB10013.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
scnpilot_solids2_trim150_scaffold_576_12
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5954..6337)
DNA (384bp) protein (128aa)
Transcription regulator protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQ07_9RHIZ
Transcription regulator protein {ECO:0000313|EMBL:EHK57197.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transcription regulator protein
scnpilot_solids2_trim150_scaffold_576_13
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6432..6923)
DNA (492bp) protein (164aa)
Glycine betaine transporter OpuD n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CS64_9RHOB
Glycine betaine transporter OpuD {ECO:0000313|EMBL:EEX11047.1}; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacter lacuscaerulensis ITI-1157.;"
transporter, BCCT family
scnpilot_solids2_trim150_scaffold_576_14
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7357..8793)
DNA (1437bp) protein (479aa)
Aspartate kinase {ECO:0000313|EMBL:KKB07423.1}; EC=2.7.2.4 {ECO:0000313|EMBL:KKB07423.1};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
aspartokinase associated with ectoine biosynthesis; K00928 aspartate kinase [EC:2.7.2.4] rbh
Aspartokinase associated with ectoine biosynthesis n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBN6_PELHB rbh
scnpilot_solids2_trim150_scaffold_576_15
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8856..9785)
DNA (930bp) protein (310aa)
ectoine hydroxylase; K10674 ectoine hydroxylase [EC:1.14.11.-] rbh
Ectoine hydroxylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBN5_PELHB rbh
Ectoine hydroxylase {ECO:0000313|EMBL:KKB84368.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
scnpilot_solids2_trim150_scaffold_576_16
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9833..10231)
DNA (399bp) protein (133aa)
L-ectoine synthase; K06720 L-ectoine synthase [EC:4.2.1.108]
L-ectoine synthase {ECO:0000256|HAMAP-Rule:MF_01255}; EC=4.2.1.108 {ECO:0000256|HAMAP-Rule:MF_01255};; N-acetyldiaminobutyrate dehydratase {ECO:0000256|HAMAP-Rule:MF_01255}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
L-ectoine synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBN4_PELHB
scnpilot_solids2_trim150_scaffold_576_17
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10244..11542)
DNA (1299bp) protein (433aa)
diaminobutyrate-pyruvate aminotransferase; K00836 diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] rbh
Diaminobutyrate-pyruvate aminotransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBN3_PELHB rbh
Diaminobutyrate-pyruvate aminotransferase {ECO:0000313|EMBL:AEQ53674.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
scnpilot_solids2_trim150_scaffold_576_18
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11572..12129)
DNA (558bp) protein (186aa)
L-2,4-diaminobutyric acid acetyltransferase; K06718 L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
L-2,4-diaminobutyric acid acetyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBN2_PELHB
L-2,4-diaminobutyric acid acetyltransferase {ECO:0000313|EMBL:AEQ53673.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
scnpilot_solids2_trim150_scaffold_576_19
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12345..12911
DNA (567bp) protein (189aa)
Transcriptional regulator, MarR family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBN1_PELHB
transcriptional regulator, MarR family protein
Transcriptional regulator, MarR family protein {ECO:0000313|EMBL:AEQ53672.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
scnpilot_solids2_trim150_scaffold_576_20
unknown

Not on your lists

13165..13641
DNA (477bp) protein (159aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_576_21
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14107..14925
DNA (819bp) protein (273aa)
CRP/FNR family transcriptional regulator n=2 Tax=Ochrobactrum intermedium RepID=M5JR82_9RHIZ
CRP/FNR family transcriptional regulator {ECO:0000313|EMBL:ELT50232.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
CRP/FNR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_576_22
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15598..16398)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11KF4_MESSB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABG62121.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_576_23
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16416..17048)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D5D7_BRAJP rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAL09796.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
scnpilot_solids2_trim150_scaffold_576_24
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17145..17546)
DNA (402bp) protein (134aa)
UPI0003CE2347 related cluster n=1 Tax=unknown RepID=UPI0003CE2347
Uncharacterized protein {ECO:0000313|EMBL:AHK42970.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_576_25
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18373..18606)
DNA (234bp) protein (78aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RPC9_9PROT
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
Na+/H+ antiporter NhaA; K03313 Na+:H+ antiporter, NhaA family
scnpilot_solids2_trim150_scaffold_576_26
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18630..19595)
DNA (966bp) protein (322aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KDU2_MESAW
Na+/H+ antiporter NhaA
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
scnpilot_solids2_trim150_scaffold_576_27
unknown

Not on your lists

19748..19861
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_576_28
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19990..20379)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000374A77F
Two-component response regulator {ECO:0000313|EMBL:BAR58421.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
two-component response regulator
scnpilot_solids2_trim150_scaffold_576_29
unknown

Not on your lists

comp(21525..21758)
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_576_30
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21999..22724
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000381C587
Electron transport transmembrane protein Sco1/SenC/PrrC {ECO:0000313|EMBL:GAN77398.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
electron transport protein SCO1/SenC; K07152
Displaying items 1-30 of 39 in total

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