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scnpilot_solids2_trim150_scaffold_578

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_578_1
unknown

Not on your lists

comp(65..304)
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_578_2

Not on your lists

372..1934
DNA (1563bp) protein (521aa)
Putative uncharacterized protein Sb09g030320 n=1 Tax=Sorghum bicolor RepID=C5YWX6_SORBI
Uncharacterized protein {ECO:0000313|EMBL:KKL07520.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_578_3

Not on your lists

comp(1858..2277)
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=A9NKC5_PICSI
Putative uncharacterized protein {ECO:0000313|EMBL:AET73661.1}; TaxID=755274 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA viruses.;" source="Phaeocystis globosa virus 14T.;"
structure-specific endonuclease subunit SLX1-like
scnpilot_solids2_trim150_scaffold_578_4
unknown

Not on your lists

2320..2817
DNA (498bp) protein (166aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_578_5
Phaeocystis globosa virus, Prymnesiovirus, Viruses

Not on your lists

comp(2846..4477)
DNA (1632bp) protein (544aa)
hypothetical protein ; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] rbh
Asparagine synthetase n=3 Tax=dsDNA viruses, no RNA stage RepID=G8DET1_9VIRU rbh
Asparagine synthetase B {ECO:0000313|EMBL:AGM15638.1}; TaxID=251749 species="Viruses; dsDNA viruses, no RNA stage; Phycodnaviridae; Prymnesiovirus; unclassified Prymnesiovirus.;" source="Phaeocystis globosa virus.;"
scnpilot_solids2_trim150_scaffold_578_6
unknown

Not on your lists

4520..4738
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_578_7
unknown

Not on your lists

comp(4735..5145)
DNA (411bp) protein (137aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_578_8
unknown

Not on your lists

5277..5594
DNA (318bp) protein (106aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_578_9
Pythium ultimum, Pythium, Pythiales, Eukaryota

Not on your lists

5764..6462
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Pythium ultimum RepID=K3WXR2_PYTUL
Uncharacterized protein {ECO:0000313|EnsemblProtists:PYU1_T009760}; TaxID=431595 species="Eukaryota; Stramenopiles; Oomycetes; Pythiales; Pythiaceae; Pythium.;" source="Pythium ultimum DAOM BR144.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_578_10
Aphanomyces invadans, Aphanomyces, Saprolegniales, Eukaryota

Not on your lists

comp(6459..7844)
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Oxytricha trifallax RepID=J9IBK9_9SPIT
Uncharacterized protein {ECO:0000313|EMBL:ETW03004.1}; TaxID=157072 species="Eukaryota; Stramenopiles; Oomycetes; Saprolegniales; Saprolegniaceae; Aphanomyces.;" source="Aphanomyces invadans.;"
AAA ATPase domain-containing protein
scnpilot_solids2_trim150_scaffold_578_11
unknown

Not on your lists

8170..9177
DNA (1008bp) protein (336aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_578_12
Phytophthora parasitica, Phytophthora, Peronosporales, Eukaryota

Not on your lists

comp(9178..9663)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Phytophthora parasitica P1569 RepID=V9FAZ7_PHYPR
Uncharacterized protein {ECO:0000313|EMBL:ETP18427.1}; TaxID=1317063 species="Eukaryota; Stramenopiles; Oomycetes; Peronosporales; Phytophthora.;" source="Phytophthora parasitica CJ01A1.;"
scnpilot_solids2_trim150_scaffold_578_13
Megavirus lba, Viruses

Not on your lists

9716..11701
DNA (1986bp) protein (662aa)
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2]
DNA ligase n=1 Tax=Megavirus lba RepID=L7Y349_9VIRU
DNA ligase {ECO:0000313|EMBL:AGD92542.1}; TaxID=1235314 species="Viruses; dsDNA viruses, no RNA stage; Mimiviridae; unclassified Mimiviridae.;" source="Megavirus lba.;"
scnpilot_solids2_trim150_scaffold_578_14
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11696..12376)
DNA (681bp) protein (227aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
ung; uracil-DNA glycosylase; K03648 uracil-DNA glycosylase [EC:3.2.2.27]
Uracil-DNA glycosylase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V2C1_9RHIZ
scnpilot_solids2_trim150_scaffold_578_15
unknown

Not on your lists

comp(12425..12772)
DNA (348bp) protein (116aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_578_16
Entamoeba nuttalli, Entamoeba, Eukaryota

Not on your lists

12863..14632
DNA (1770bp) protein (590aa)
5'-3' exoribonuclease ; K12619 5'-3' exoribonuclease 2 [EC:3.1.13.-]
5'-3' exoribonuclease, putative n=1 Tax=Entamoeba dispar (strain ATCC PRA-260 / SAW760) RepID=B0ETH4_ENTDS
5'-3' exonuclease domain containing protein {ECO:0000313|EMBL:EKE38009.1}; TaxID=1076696 species="Eukaryota; Amoebozoa; Archamoebae; Entamoebidae; Entamoeba.;" source="Entamoeba nuttalli (strain P19) (Amoeba).;"
scnpilot_solids2_trim150_scaffold_578_17
unknown

Not on your lists

14803..14988
DNA (186bp) protein (62aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_578_18

Not on your lists

15311..15598
DNA (288bp) protein (96aa)
dam; site-specific DNA adenine methylase (EC:2.1.1.72); K06223 DNA adenine methylase [EC:2.1.1.72]
Putative site-specific DNA methyltransferase n=1 Tax=Organic Lake phycodnavirus 2 RepID=F2Y2A0_9PHYC
Putative site-specific DNA methyltransferase {ECO:0000313|EMBL:ADX06203.1}; TaxID=938082 species="Viruses; dsDNA viruses, no RNA stage; Phycodnaviridae; environmental samples.;" source="Organic Lake phycodnavirus 2.;"
scnpilot_solids2_trim150_scaffold_578_19

Not on your lists

15823..17364
DNA (1542bp) protein (514aa)
AAA family ATPase n=3 Tax=unclassified Mimiviridae RepID=G8EDU9_9VIRU
AAA family ATPase {ECO:0000313|EMBL:AEQ60770.1}; TaxID=554168 species="Viruses; dsDNA viruses, no RNA stage; Mimiviridae; unclassified Mimiviridae.;" source="Acanthamoeba castellanii mamavirus.;"
ATP-dependent zinc metalloprotease FtsH 2-like
scnpilot_solids2_trim150_scaffold_578_20
unknown

Not on your lists

comp(17366..17623)
DNA (258bp) protein (86aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_578_21

Not on your lists

comp(17648..18469)
DNA (822bp) protein (274aa)
Proliferating cell nuclear antigen n=3 Tax=dsDNA viruses, no RNA stage RepID=G8DE40_9VIRU
Proliferating cell nuclear antigen {ECO:0000313|EMBL:AET72942.1}; TaxID=755273 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA viruses.;" source="Phaeocystis globosa virus 12T.;"
proliferating cell nuclear antigen; K04802 proliferating cell nuclear antigen
scnpilot_solids2_trim150_scaffold_578_22
unknown

Not on your lists

comp(18532..18909)
DNA (378bp) protein (126aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_578_23
R_RIF_OD1_12_45_13b, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

18961..20262
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Trypanosoma cruzi RepID=K4E7L2_TRYCR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_12_45_13b_curated
scnpilot_solids2_trim150_scaffold_578_24
unknown

Not on your lists

20303..20698
DNA (396bp) protein (132aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_578_25
unknown

Not on your lists

20749..21357
DNA (609bp) protein (203aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_578_26
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21359..22258
DNA (900bp) protein (300aa)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=1261071 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis JCP8522.;"
type II R/M system modification methyltransferase; K06223 DNA adenine methylase [EC:2.1.1.72]
DNA adenine methylase n=1 Tax=Gardnerella vaginalis JCP8522 RepID=S4GRN9_GARVA
scnpilot_solids2_trim150_scaffold_578_27
unknown

Not on your lists

comp(22220..23863)
DNA (1644bp) protein (548aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_578_28
unknown

Not on your lists

23874..24173
DNA (300bp) protein (100aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_578_29
unknown

Not on your lists

comp(24408..25061)
DNA (654bp) protein (218aa)
PREDICTED: LOW QUALITY PROTEIN: remodeling and spacing factor 1-like n=1 Tax=Takifugu rubripes RepID=UPI0002990A05
remodeling and spacing factor 1-like
scnpilot_solids2_trim150_scaffold_578_30
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

comp(25348..27399)
DNA (2052bp) protein (684aa)
Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VVC4_NAEGR
hypothetical protein
Predicted protein {ECO:0000313|EMBL:EFC39285.1}; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
Displaying items 1-30 of 51 in total

View Taxonomy