ggKbase home page

scnpilot_solids2_trim150_scaffold_581

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_581_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..265
DNA (264bp) protein (88aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVE3_9GAMM
scnpilot_solids2_trim150_scaffold_581_2
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(325..873)
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Delftia RepID=A7KK46_DELAC
Uncharacterized protein {ECO:0000313|EMBL:GAN45328.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
scnpilot_solids2_trim150_scaffold_581_3
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(891..3566)
DNA (2676bp) protein (892aa)
Type III restriction protein res subunit n=1 Tax=Thauera phenylacetica B4P RepID=N6ZMV5_9RHOO rbh
Restriction endonuclease subunit R {ECO:0000313|EMBL:GAN45329.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
type III restriction protein res subunit
scnpilot_solids2_trim150_scaffold_581_4
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3563..4120)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Halomonas stevensii RepID=UPI000368161B
hypothetical protein
Tax=CG_Delta_06
scnpilot_solids2_trim150_scaffold_581_5
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4117..5313)
DNA (1197bp) protein (399aa)
chromosome segregation protein SMC n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000373DB78 rbh
ATPase-like protein rbh
Tax=GWA2_Rhodocyclales_65_20_curated
scnpilot_solids2_trim150_scaffold_581_6
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5409..7013)
DNA (1605bp) protein (535aa)
putative DNA methylase N-4/N-6 (EC:2.1.1.113) rbh
Putative DNA methylase N-4/N-6 {ECO:0000313|EMBL:CAZ90291.1}; EC=2.1.1.113 {ECO:0000313|EMBL:CAZ90291.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
Putative DNA methylase N-4/N-6 n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CP13_THIA3 rbh
scnpilot_solids2_trim150_scaffold_581_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7141..8304)
DNA (1164bp) protein (388aa)
Adenosine monophosphate-protein transferase {ECO:0000256|PIRNR:PIRNR038925}; EC=2.7.7.n1 {ECO:0000256|PIRNR:PIRNR038925};; AMPylator {ECO:0000256|PIRNR:PIRNR038925}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VS27_9GAMM rbh
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_581_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8437..10293
DNA (1857bp) protein (619aa)
ABC transporter ATPase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVE2_9GAMM rbh
ABC transporter ATPase {ECO:0000313|EMBL:EIL91183.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ATPase component of ABC transporters with duplicated ATPase domain
scnpilot_solids2_trim150_scaffold_581_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10442..12376)
DNA (1935bp) protein (645aa)
Metalloprotease II n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVE1_9GAMM rbh
Metalloprotease II {ECO:0000313|EMBL:EIL91182.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
metalloprotease II rbh
scnpilot_solids2_trim150_scaffold_581_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12656..13285
DNA (630bp) protein (210aa)
Glutathione S-transferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVE0_9GAMM rbh
Glutathione S-transferase {ECO:0000313|EMBL:EIL91181.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glutathione S-transferase
scnpilot_solids2_trim150_scaffold_581_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13290..13565
DNA (276bp) protein (92aa)
Excinuclease ABC C subunit domain protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVD9_9GAMM
Excinuclease ABC C subunit domain protein {ECO:0000313|EMBL:EIL91180.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative endonuclease containing a URI domain
scnpilot_solids2_trim150_scaffold_581_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13788..14552
DNA (765bp) protein (255aa)
Integral membrane protein TerC n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVD8_9GAMM rbh
Integral membrane protein TerC {ECO:0000313|EMBL:EIL91179.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
membrane protein TerC, possibly involved in tellurium resistance
scnpilot_solids2_trim150_scaffold_581_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14549..15865)
DNA (1317bp) protein (439aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Multi-sensor signal transduction histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVD7_9GAMM rbh
multi-sensor signal transduction histidine kinase rbh
scnpilot_solids2_trim150_scaffold_581_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15903..17306)
DNA (1404bp) protein (468aa)
Two component, sigma54 specific, Fis family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVD6_9GAMM rbh
Two component, sigma54 specific, Fis family transcriptional regulator {ECO:0000313|EMBL:EIL91177.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
two component, sigma54 specific, Fis family transcriptional regulator rbh
scnpilot_solids2_trim150_scaffold_581_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17362..19782)
DNA (2421bp) protein (807aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVD5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL91176.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_581_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19779..22220)
DNA (2442bp) protein (814aa)
Permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVD4_9GAMM rbh
Permease {ECO:0000313|EMBL:EIL91175.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
permease rbh
scnpilot_solids2_trim150_scaffold_581_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22255..24696)
DNA (2442bp) protein (814aa)
Permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVD3_9GAMM rbh
Permease {ECO:0000313|EMBL:EIL91174.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
permease
scnpilot_solids2_trim150_scaffold_581_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24693..25457)
DNA (765bp) protein (255aa)
ABC transporter-like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVD2_9GAMM rbh
ABC transporter-like protein {ECO:0000313|EMBL:EIL91173.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_581_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25524..26777)
DNA (1254bp) protein (418aa)
RND family efflux transporter MFP subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVD1_9GAMM rbh
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:EIL91172.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RND family efflux transporter MFP subunit rbh
scnpilot_solids2_trim150_scaffold_581_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26955..28667)
DNA (1713bp) protein (571aa)
PBS lyase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVD0_9GAMM rbh
PBS lyase {ECO:0000313|EMBL:EIL91171.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_581_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28687..31392)
DNA (2706bp) protein (902aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.1.1.31 {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Phosphoenolpyruvate carboxylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVC9_9GAMM rbh
scnpilot_solids2_trim150_scaffold_581_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31715..32479
DNA (765bp) protein (255aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Adenosylhomocysteinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVC8_9GAMM
adenosylhomocysteinase
Displaying 22 items

View Taxonomy