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scnpilot_solids2_trim150_scaffold_597

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_597_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..767)
DNA (765bp) protein (255aa)
Dipeptidyl peptidase IV n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7A0_9GAMM
Dipeptidyl peptidase IV {ECO:0000313|EMBL:EIL95341.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
dipeptidyl aminopeptidase/acylaminoacyl peptidase
scnpilot_solids2_trim150_scaffold_597_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1028..1780
DNA (753bp) protein (251aa)
Putative glutathione S-transferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7A1_9GAMM rbh
Putative glutathione S-transferase {ECO:0000313|EMBL:EIL95342.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glutathione S-transferase
scnpilot_solids2_trim150_scaffold_597_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1953..2858)
DNA (906bp) protein (302aa)
LysR family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7A2_9GAMM rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EIL95343.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_597_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2956..3948
DNA (993bp) protein (331aa)
Aldo/keto reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7A3_9GAMM rbh
Aldo/keto reductase {ECO:0000313|EMBL:EIL95344.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative oxidoreductase, aryl-alcohol dehydrogenase like protein
scnpilot_solids2_trim150_scaffold_597_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4070..4894
DNA (825bp) protein (275aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00037296}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00817}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00817}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" s
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7A4_9GAMM rbh
7-cyano-7-deazaguanine reductase
scnpilot_solids2_trim150_scaffold_597_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5042..5623
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7A5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL95346.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_597_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5669..6778)
DNA (1110bp) protein (370aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7A6_9GAMM rbh
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:EIL95347.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glycerophosphoryl diester phosphodiesterase rbh
scnpilot_solids2_trim150_scaffold_597_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6790..7797)
DNA (1008bp) protein (336aa)
Lysophospholipase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7A7_9GAMM rbh
Lysophospholipase {ECO:0000313|EMBL:EIL95348.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
lysophospholipase rbh
scnpilot_solids2_trim150_scaffold_597_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7801..10236)
DNA (2436bp) protein (812aa)
TonB-dependent receptor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7A8_9GAMM rbh
TonB-dependent receptor {ECO:0000313|EMBL:EIL95349.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TonB-dependent receptor rbh
scnpilot_solids2_trim150_scaffold_597_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10627..10785
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7A9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95350.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_597_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10807..12675)
DNA (1869bp) protein (623aa)
RecBCD enzyme subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01487};; Exonuclease V subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; Helicase/nuclease RecBCD subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA helicase/exodeoxyribonuclease V, alpha subunit (EC:3.1.11.5)
Exodeoxyribonuclease V subunit alpha n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7B0_9GAMM rbh
scnpilot_solids2_trim150_scaffold_597_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12672..16283)
DNA (3612bp) protein (1204aa)
RecBCD enzyme subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01485};; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; Exonuclease V subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; Helicase/nuclease RecBCD subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Exodeoxyribonuclease V subunit beta n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7B1_9GAMM rbh
ATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing
scnpilot_solids2_trim150_scaffold_597_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16280..19945)
DNA (3666bp) protein (1222aa)
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; Helicase/nuclease RecBCD subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA helicase/exodeoxyribonuclease V, gamma subunit (EC:3.1.11.5)
Exodeoxyribonuclease V subunit gamma n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7B2_9GAMM rbh
scnpilot_solids2_trim150_scaffold_597_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19975..23208)
DNA (3234bp) protein (1078aa)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Rhodanobacter denitrificans RepID=M4NT65_9GAMM rbh
type I site-specific deoxyribonuclease, HsdR family rbh
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:AGG90681.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_597_15
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23258..24391)
DNA (1134bp) protein (378aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GFC3_NITSI rbh
Toxin Fic {ECO:0000313|EMBL:KJR66319.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
filamentation induced by cAMP protein Fic rbh
scnpilot_solids2_trim150_scaffold_597_16
Leptonema illini, Leptonema, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(24388..25542)
DNA (1155bp) protein (385aa)
restriction modification system DNA specificity domain-containing protein; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3]
Restriction modification system DNA specificity domain-containing protein n=1 Tax=Leptonema illini DSM 21528 RepID=H2CK06_9LEPT rbh
Restriction modification system DNA specificity domain-containing protein {ECO:0000313|EMBL:EHQ06095.1}; TaxID=929563 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptonema.;" source="Leptonema illini DSM 21528.;"
scnpilot_solids2_trim150_scaffold_597_17
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25605..27752)
DNA (2148bp) protein (716aa)
N-6 DNA methylase; K03427 type I restriction enzyme M protein [EC:2.1.1.72] rbh
N-6 DNA methylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLX9_9GAMM rbh
N-6 DNA methylase {ECO:0000313|EMBL:AEJ00019.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
scnpilot_solids2_trim150_scaffold_597_trna_1
unknown

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comp(27915..27988)
DNA (74bp)
transferRNA Arg
scnpilot_solids2_trim150_scaffold_597_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28141..30042)
DNA (1902bp) protein (634aa)
Glycyl aminopeptidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIB1_9GAMM rbh
Glycyl aminopeptidase {ECO:0000313|EMBL:AGG90685.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
glycyl aminopeptidase rbh
scnpilot_solids2_trim150_scaffold_597_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30333..31406
DNA (1074bp) protein (358aa)
Signal transduction ggdef domain protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7G5_9GAMM rbh
Signal transduction ggdef domain protein {ECO:0000313|EMBL:EIL95406.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
diguanylate cyclase (GGDEF) domain-containing protein rbh
scnpilot_solids2_trim150_scaffold_597_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31441..31842)
DNA (402bp) protein (134aa)
Amino acid transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7G6_9GAMM
Amino acid transporter {ECO:0000313|EMBL:EIL95407.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
amino acid transporter
Displaying 21 items

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