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scnpilot_solids2_trim150_scaffold_599

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_599_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..739
DNA (738bp) protein (246aa)
ABC-type polysaccharide/polyol phosphate export systems, permease component n=1 Tax=Rhodanobacter denitrificans RepID=M4NCJ3_9GAMM
ABC-type polysaccharide/polyol phosphate export systems, permease component
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_599_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(823..2064)
DNA (1242bp) protein (414aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammapr
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ71_9GAMM
scnpilot_solids2_trim150_scaffold_599_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2304..2750
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHB5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98856.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_599_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2935..3105
DNA (171bp) protein (57aa)
UPF0391 membrane protein UU9_10022 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ74_9GAMM
Protein of unknown function (DUF1328)
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_599_5
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3168..5039
DNA (1872bp) protein (624aa)
DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHB8_9GAMM
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
scnpilot_solids2_trim150_scaffold_599_6
unknown

Not on your lists

5036..5158
DNA (123bp) protein (41aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_599_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5145..5768
DNA (624bp) protein (208aa)
DedA protein family n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ76_9GAMM
putative membrane-associated protein
DedA protein family {ECO:0000313|EMBL:EIL89367.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_599_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5851..6483
DNA (633bp) protein (211aa)
Glutathione S-transferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCJ3_9GAMM
glutathione S-transferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_599_9
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6542..7117)
DNA (576bp) protein (192aa)
Relaxation protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR86_9GAMM
Relaxation protein {ECO:0000313|EMBL:EIL89727.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_599_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7192..8610)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR87_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89728.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_599_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8625..9227)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR88_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89729.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_599_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9409..9798
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VMK5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL88446.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Protein of unknown function (DUF2384)
scnpilot_solids2_trim150_scaffold_599_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9969..10655
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCJ9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97190.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
RES domain-containing protein
scnpilot_solids2_trim150_scaffold_599_14
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10723..11610)
DNA (888bp) protein (296aa)
Phenylalanine 4-monooxygenase {ECO:0000313|EMBL:EIL88440.1}; EC=1.14.16.1 {ECO:0000313|EMBL:EIL88440.1};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Phenylalanine 4-hydroxylase (EC:1.14.16.1)
Phenylalanine 4-monooxygenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VMJ9_9GAMM
scnpilot_solids2_trim150_scaffold_599_15
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11746..12237
DNA (492bp) protein (164aa)
AsnC family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCK3_9GAMM
transcriptional regulator
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_599_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12256..13071
DNA (816bp) protein (272aa)
Acetyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VMJ7_9GAMM
Acetyltransferase {ECO:0000313|EMBL:EIL88438.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase
scnpilot_solids2_trim150_scaffold_599_17
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13068..14081
DNA (1014bp) protein (338aa)
Putative hydrolase of the alpha/beta-hydrolase fold protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL41_9GAMM
Putative hydrolase of the alpha/beta-hydrolase fold protein {ECO:0000313|EMBL:EIL87932.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative hydrolase of the alpha/beta-hydrolase fold protein
scnpilot_solids2_trim150_scaffold_599_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14121..17999)
DNA (3879bp) protein (1293aa)
Putative cyclic beta 1-2 glucan synthetase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUT5_9GAMM
Putative cyclic beta 1-2 glucan synthetase {ECO:0000313|EMBL:EIL97924.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cellobiose phosphorylase
scnpilot_solids2_trim150_scaffold_599_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18131..19528
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEN4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97925.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_599_20
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19542..20900
DNA (1359bp) protein (453aa)
Putative uncharacterized protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IW14_9GAMM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EGW21825.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_599_21
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20915..22459
DNA (1545bp) protein (515aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00520 mercuric reductase [EC:1.16.1.1]
Dihydrolipoyl dehydrogenase n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IW13_9GAMM
Mercuric reductase {ECO:0000313|EMBL:KGM51653.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
scnpilot_solids2_trim150_scaffold_599_22
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22461..23366
DNA (906bp) protein (302aa)
6-phosphogluconate dehydrogenase, decarboxylating (EC:1.1.1.44) rbh
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Rhodanobacter denitrificans RepID=M4NA58_9GAMM rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_599_23
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23353..23967)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003661940
Uncharacterized protein {ECO:0000313|EMBL:KGI77820.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_599_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24210..26012)
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXE0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91881.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_599_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26099..26701)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NHI5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87291.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_599_26
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26704..26916)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQJ2_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_599_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26980..27684)
DNA (705bp) protein (235aa)
Putative two-component system response regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRJ3_9GAMM
Putative two-component system response regulator {ECO:0000313|EMBL:EIL89834.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
response regulator of the LytR/AlgR family
scnpilot_solids2_trim150_scaffold_599_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27681..28736)
DNA (1056bp) protein (352aa)
Histidine kinase n=1 Tax=Rhodanobacter denitrificans RepID=M4NHJ0_9GAMM
Histidine kinase
Histidine kinase {ECO:0000313|EMBL:AGG87296.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_599_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28760..29422)
DNA (663bp) protein (221aa)
Putative esterase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRF3_9GAMM
Putative esterase {ECO:0000313|EMBL:EIL89794.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative esterase
scnpilot_solids2_trim150_scaffold_599_30
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29564..31777)
DNA (2214bp) protein (738aa)
penicillin amidase n=1 Tax=Dyella ginsengisoli RepID=UPI000374DC20
Penicillin acylase {ECO:0000313|EMBL:EIL99597.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
penicillin acylase
Displaying items 1-30 of 31 in total

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