ggKbase home page

scnpilot_solids2_trim150_scaffold_605

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_605_1
unknown

Not on your lists

comp(3..353)
DNA (351bp) protein (117aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_605_2
unknown

Not on your lists

comp(830..1315)
DNA (486bp) protein (162aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_605_3
bacterium YEK0313, Bacteria

Not on your lists

comp(1312..3372)
DNA (2061bp) protein (687aa)
5-oxoprolinase; K01473 N-methylhydantoinase A [EC:3.5.2.14] rbh
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IVQ2_POLGS rbh
Acetophenone carboxylase gamma subunit {ECO:0000313|EMBL:CEJ12787.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
scnpilot_solids2_trim150_scaffold_605_4
Oceanimonas sp. GK1, Oceanimonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3378..5156)
DNA (1779bp) protein (593aa)
hydantoinase B/oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14]
Hydantoinase B/oxoprolinase n=1 Tax=Oceanimonas sp. (strain GK1) RepID=H2FX70_OCESG
Hydantoinase B/oxoprolinase {ECO:0000313|EMBL:AEY02202.1}; TaxID=511062 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Oceanimonas.;" source="Oceanimonas sp. (strain GK1).;"
scnpilot_solids2_trim150_scaffold_605_5
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5153..6232)
DNA (1080bp) protein (360aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW96255.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Luciferase family protein id=3229904 bin=GWF2_Methylomirabilis_70_14 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
luciferase-like protein
scnpilot_solids2_trim150_scaffold_605_6
Edwardsiella ictaluri, Edwardsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6234..6590)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Edwardsiella ictaluri (strain 93-146) RepID=C5BCG5_EDWI9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR68259.1}; TaxID=634503 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella.;" source="Edwardsiella ictaluri (strain 93-146).;"
scnpilot_solids2_trim150_scaffold_605_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6592..8907)
DNA (2316bp) protein (772aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14]
hypothetical protein n=1 Tax=Nocardia sp. 348MFTsu5.1 RepID=UPI00037A1485
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
scnpilot_solids2_trim150_scaffold_605_8
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8900..11041)
DNA (2142bp) protein (714aa)
hydantoinase; K01473 N-methylhydantoinase A [EC:3.5.2.14]
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F0FA26
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
scnpilot_solids2_trim150_scaffold_605_9
Ruegeria sp. ANG-S4, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11346..12542)
DNA (1197bp) protein (399aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC45931.1}; TaxID=1577904 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-S4.;"
scnpilot_solids2_trim150_scaffold_605_10
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12605..14779)
DNA (2175bp) protein (725aa)
Putative Histidine kinase id=1785091 bin=GWB2_Chloroflexi_54_36 species=Oscillatoria sp. PCC 6506 genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
GAF sensor hybrid histidine kinase
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_solids2_trim150_scaffold_605_11
unknown

Not on your lists

comp(15805..16707)
DNA (903bp) protein (301aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_605_trna_1
unknown

Not on your lists

comp(17272..17342)
DNA (71bp)
transferRNA Cys
scnpilot_solids2_trim150_scaffold_605_12
unknown

Not on your lists

17640..18263
DNA (624bp) protein (208aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_605_13
unknown

Not on your lists

18444..18758
DNA (315bp) protein (105aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_605_14
Burkholderia sp. RPE64, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18776..19114
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. RPE64 RepID=R4WMU1_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN25824.1}; TaxID=758793 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE64.;"
scnpilot_solids2_trim150_scaffold_605_15
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(19118..19399)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B680F4
Uncharacterized protein {ECO:0000313|EMBL:EFH87218.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_605_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(19442..20971)
DNA (1530bp) protein (510aa)
Flavin-binding family monooxygenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZ35_CONWI rbh
flavin-binding family monooxygenase rbh
Flavin-binding family monooxygenase {ECO:0000313|EMBL:ADB49909.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_605_17
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(21016..22203)
DNA (1188bp) protein (396aa)
Saccharopine dehydrogenase (NAD(+),L-glutamate-forming) (EC:1.5.1.9) rbh
Putative membrane protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E3I1_9ACTN rbh
Putative membrane protein {ECO:0000313|EMBL:EHN11761.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
scnpilot_solids2_trim150_scaffold_605_18
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22237..22605)
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Thiocapsa marina 5811 RepID=F9U8A2_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGV19514.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_605_19
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22615..23457)
DNA (843bp) protein (281aa)
Chloride peroxidase n=2 Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2JMY2_STRHJ rbh
Bromoperoxidase {ECO:0000313|EMBL:KHL16066.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
chloride peroxidase rbh
scnpilot_solids2_trim150_scaffold_605_20
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23553..24056
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI000382C9A6
GCN5 family acetyltransferase {ECO:0000313|EMBL:EXU64506.1}; TaxID=1158056 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
N-acetyltransferase GCN5
scnpilot_solids2_trim150_scaffold_605_21
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

24053..24694
DNA (642bp) protein (214aa)
pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5); K00275 pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8V1_CONWI
scnpilot_solids2_trim150_scaffold_605_22
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24740..25366)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1B7F2_RHOOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH51605.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
scnpilot_solids2_trim150_scaffold_605_23
unknown

Not on your lists

25483..25896
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B7B7E6
scnpilot_solids2_trim150_scaffold_605_24
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

25947..27560
DNA (1614bp) protein (538aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B59FBE
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_605_25
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27642..28571
DNA (930bp) protein (310aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S5F5_GEOOG rbh
NAD-dependent epimerase/dehydratase rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADB75235.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
scnpilot_solids2_trim150_scaffold_605_26
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

28679..29239
DNA (561bp) protein (187aa)
YceI family protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE71_CONWI
hypothetical protein
YceI family protein {ECO:0000313|EMBL:ADB53563.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids2_trim150_scaffold_605_27
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29226..29672
DNA (447bp) protein (149aa)
Uncharacterized protein n=2 Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2JPS2_STRHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEY87210.1}; TaxID=1133850 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jinggangensis (strain 5008).;"
scnpilot_solids2_trim150_scaffold_605_28
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29674..30225)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Streptomyces prunicolor RepID=UPI00036D01E8
putative HTH-type transcriptional regulator
Putative HTH-type transcriptional regulator {ECO:0000313|EMBL:AEV84727.1}; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
scnpilot_solids2_trim150_scaffold_605_29
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

30356..31090
DNA (735bp) protein (245aa)
Beta-lactamase domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCN7_CONWI
beta-lactamase
Beta-lactamase domain protein {ECO:0000313|EMBL:ADB49510.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying 30 items

View Taxonomy