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scnpilot_solids2_trim150_scaffold_620

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_620_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52..495)
DNA (444bp) protein (148aa)
Regulatory protein LysR n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGQ0_9GAMM
Regulatory protein LysR {ECO:0000313|EMBL:EIL98641.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
LysR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_620_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

876..2024
DNA (1149bp) protein (383aa)
Cytochrome C family protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ96_9GAMM rbh
Cytochrome C family protein {ECO:0000313|EMBL:EIL89387.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
cytochrome C family protein
scnpilot_solids2_trim150_scaffold_620_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2037..4640
DNA (2604bp) protein (868aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ95_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL89386.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_620_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4652..5374
DNA (723bp) protein (241aa)
Cytochrome c4 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ94_9GAMM
Cytochrome c4 {ECO:0000313|EMBL:EIL89385.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
cytochrome c4
scnpilot_solids2_trim150_scaffold_620_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6072..6623
DNA (552bp) protein (184aa)
Protease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W171_9GAMM
Protease {ECO:0000313|EMBL:EIL93212.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
protease
scnpilot_solids2_trim150_scaffold_620_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7142..7525
DNA (384bp) protein (128aa)
TraR/DksA family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDI6_9GAMM
DnaK suppressor protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_620_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7712..8323
DNA (612bp) protein (204aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VRX5_9GAMM
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EIL89966.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative NADH-flavin reductase
scnpilot_solids2_trim150_scaffold_620_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8379..8945
DNA (567bp) protein (189aa)
DNA-binding ferritin-like protein (Oxidative damage protectant) n=1 Tax=Rhodanobacter denitrificans RepID=M4NBY0_9GAMM rbh
DNA-binding ferritin-like protein (oxidative damage protectant) rbh
DNA-binding ferritin-like protein (Oxidative damage protectant) {ECO:0000313|EMBL:AGG87277.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_620_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8992..9564
DNA (573bp) protein (191aa)
NADPH-dependent FMN reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUS3_9GAMM
putative flavoprotein
Putative flavoprotein {ECO:0000313|EMBL:AGG87276.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_620_10
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9614..10885
DNA (1272bp) protein (424aa)
Peptidase M20D, amidohydrolase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRP5_9GAMM
Peptidase M20D, amidohydrolase {ECO:0000313|EMBL:EIL89886.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
amidohydrolase
scnpilot_solids2_trim150_scaffold_620_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11091..11477
DNA (387bp) protein (129aa)
Putative membrane-attached protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7Z9_9GAMM
Putative membrane-attached protein {ECO:0000313|EMBL:EIL95590.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative periplasmic or secreted lipoprotein
scnpilot_solids2_trim150_scaffold_620_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11641..11799
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTA1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90442.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_620_13
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12034..12222)
DNA (189bp) protein (63aa)
CsbD-like protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WWX7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJV33187.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_620_14
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12324..12761)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMN1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL88472.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_620_15
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12733..12996)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W032_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJV33035.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_620_16
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13059..13835)
DNA (777bp) protein (259aa)
succinate dehydrogenase subunit B (EC:1.3.5.1)
Succinate dehydrogenase iron-sulfur subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W033_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_620_17
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13997..15784)
DNA (1788bp) protein (596aa)
succinate dehydrogenase, flavoprotein subunit (EC:1.3.5.1)
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMN4_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_620_18
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15804..16208)
DNA (405bp) protein (135aa)
succinate dehydrogenase subunit D (EC:1.3.5.1)
Succinate dehydrogenase membrane anchor subunit n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMN5_9GAMM
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_620_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16205..16600)
DNA (396bp) protein (132aa)
succinate dehydrogenase subunit C (EC:1.3.5.1)
Succinate dehydrogenase membrane anchor subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W036_9GAMM
Succinate dehydrogenase membrane anchor subunit {ECO:0000313|EMBL:EIL92827.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_620_20
unknown

Not on your lists

comp(16701..16889)
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_620_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17009..17812
DNA (804bp) protein (268aa)
Folate-binding protein YgfZ n=1 Tax=Rhodanobacter denitrificans RepID=I4WWH3_9GAMM
folate-binding protein YgfZ
Folate-binding protein YgfZ {ECO:0000313|EMBL:AGG89475.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_620_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18273..18707
DNA (435bp) protein (145aa)
Cell Wall Hydrolase n=2 Tax=Rhodanobacter denitrificans RepID=M4NPB3_9GAMM
Cell Wall Hydrolase
Cell Wall Hydrolase {ECO:0000313|EMBL:AGG89476.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_620_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18831..19319)
DNA (489bp) protein (163aa)
Outer membrane lipoprotein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWH5_9GAMM
outer membrane lipoprotein
Outer membrane lipoprotein {ECO:0000313|EMBL:AGG89477.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_620_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19366..20016)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W041_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92832.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative outer membrane lipoprotein
scnpilot_solids2_trim150_scaffold_620_25
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20185..20964
DNA (780bp) protein (260aa)
Hydrolase, TatD family protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMP2_9GAMM
Hydrolase, TatD family protein {ECO:0000313|EMBL:EIL88483.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hydrolase, TatD family
scnpilot_solids2_trim150_scaffold_620_26
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21147..21632
DNA (486bp) protein (162aa)
Polyhydroxyalkonate synthesis repressor PhaR n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMP7_9GAMM
Polyhydroxyalkonate synthesis repressor PhaR {ECO:0000313|EMBL:EIL88488.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
polyhydroxyalkanoate synthesis repressor PhaR
scnpilot_solids2_trim150_scaffold_620_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21711..22472
DNA (762bp) protein (254aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AGG89485.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AGG89485.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWI4_9GAMM
scnpilot_solids2_trim150_scaffold_620_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22588..23001
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W051_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92842.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF3293)
scnpilot_solids2_trim150_scaffold_620_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23060..23695
DNA (636bp) protein (212aa)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Cytochrome c biogenesis protein CcmA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W052_9GAMM
heme ABC exporter, ATP-binding protein CcmA
scnpilot_solids2_trim150_scaffold_620_30
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23705..24517
DNA (813bp) protein (271aa)
Heme exporter protein B n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W053_9GAMM
heme exporter protein CcmB
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Displaying items 1-30 of 40 in total

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