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scnpilot_solids2_trim150_scaffold_621

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_621_1
unknown

Not on your lists

comp(1..153)
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_621_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(254..1561)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZZ0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92781.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_621_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1671..2009
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W954_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95995.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_621_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2100..3182
DNA (1083bp) protein (361aa)
Phospholipase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WUC2_9GAMM
Phospholipase {ECO:0000313|EMBL:EIM03064.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
outer membrane phospholipase A
scnpilot_solids2_trim150_scaffold_621_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3234..3731)
DNA (498bp) protein (166aa)
Glutathione peroxidase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VZZ5_9GAMM
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
glutathione peroxidase
scnpilot_solids2_trim150_scaffold_621_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3803..4990)
DNA (1188bp) protein (396aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838}; Short=NAPRTase {ECO:0000256|HAMAP-Rule:MF_00570};; EC=6.3.4.21 {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Q7_9GAMM
nicotinate phosphoribosyltransferase
scnpilot_solids2_trim150_scaffold_621_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5259..6362)
DNA (1104bp) protein (368aa)
Putative aminopeptidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFU1_9GAMM
putative aminopeptidase
Putative aminopeptidase {ECO:0000313|EMBL:AGG89759.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_621_8
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6432..6950)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NFQ5_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_621_9
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7035..7865)
DNA (831bp) protein (277aa)
Histone H1 family protein nucleoprotein HC2 n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CNT3_SIDLE
histone H1 family protein nucleoprotein HC2
HC2 nucleoprotein {ECO:0000313|EMBL:ETN91492.1}; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MOLA455.;"
scnpilot_solids2_trim150_scaffold_621_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7981..8586)
DNA (606bp) protein (202aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY55_9GAMM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG89762.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_621_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8748..9653
DNA (906bp) protein (302aa)
Phenazine biosynthesis protein PhzF family n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ94_9GAMM
phenazine biosynthesis protein PhzF family
Phenazine biosynthesis protein PhzF family {ECO:0000313|EMBL:AGG89763.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_621_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9708..11105)
DNA (1398bp) protein (466aa)
primary replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYJ2_9GAMM
Replicative DNA helicase {ECO:0000313|EMBL:EIL92283.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_621_13
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11392..11841)
DNA (450bp) protein (150aa)
50S ribosomal protein L9 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5S2_9GAMM
LSU ribosomal protein L9P
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_621_14
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11976..12206)
DNA (231bp) protein (77aa)
30S ribosomal protein S18 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQB3_9GAMM
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
SSU ribosomal protein S18P
scnpilot_solids2_trim150_scaffold_621_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12229..12639)
DNA (411bp) protein (137aa)
30S ribosomal protein S6 n=1 Tax=Rhodanobacter denitrificans RepID=I4WTK2_9GAMM
SSU ribosomal protein S6P
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_621_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12840..13166)
DNA (327bp) protein (109aa)
Iron-sulfur cluster assembly accessory protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W523_9GAMM
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:EIL94564.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Iron-sulfur cluster assembly accessory protein
scnpilot_solids2_trim150_scaffold_621_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13295..14710
DNA (1416bp) protein (472aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5R8_9GAMM
scnpilot_solids2_trim150_scaffold_621_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14725..15579
DNA (855bp) protein (285aa)
Maltose operon periplasmic protein (MalM) n=1 Tax=Rhodanobacter denitrificans RepID=I4WTJ9_9GAMM
Maltose operon periplasmic protein precursor (MalM)
Maltose operon periplasmic protein (MalM) {ECO:0000313|EMBL:AGG88328.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_621_19
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15576..15890
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNA0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL88691.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_621_20
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16084..16749
DNA (666bp) protein (222aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
carbonic anhydrase; K01673 carbonic anhydrase [EC:4.2.1.1]
Beta carbonic anhydrase n=1 Tax=Pandoraea sp. RB-44 RepID=V5UEE6_9BURK
scnpilot_solids2_trim150_scaffold_621_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16746..17543)
DNA (798bp) protein (266aa)
N-formylglutamate amidohydrolase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTJ3_9GAMM
N-formylglutamate amidohydrolase
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:AGG88322.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_621_22
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17702..19060
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WKW6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM00108.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_621_23
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19225..19800
DNA (576bp) protein (192aa)
Cell wall-associated hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQA0_9GAMM
Cell wall-associated hydrolase {ECO:0000313|EMBL:EIM01642.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cell wall-associated hydrolase, invasion-associated protein
scnpilot_solids2_trim150_scaffold_621_24
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19898..20383)
DNA (486bp) protein (162aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQ99_9GAMM
FKBP-type peptidyl-prolyl cis-trans isomerase
scnpilot_solids2_trim150_scaffold_621_25
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20429..21679)
DNA (1251bp) protein (417aa)
Arabinose efflux permease family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NCB4_9GAMM
Sugar transporter {ECO:0000313|EMBL:KJV27788.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
arabinose efflux permease family protein
scnpilot_solids2_trim150_scaffold_621_26
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21814..22497
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJF3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87344.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
scnpilot_solids2_trim150_scaffold_621_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22721..23734
DNA (1014bp) protein (338aa)
ATP-dependent RNA helicase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTI4_9GAMM
DNA/RNA helicase, superfamily II
DNA/RNA helicase, superfamily II {ECO:0000313|EMBL:AGG88313.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_621_28
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24112..24954)
DNA (843bp) protein (281aa)
Esterase n=1 Tax=Rhodanobacter denitrificans RepID=I4WTI3_9GAMM
S-formylglutathione hydrolase
S-formylglutathione hydrolase {ECO:0000313|EMBL:AGG88312.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_621_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25096..27012
DNA (1917bp) protein (639aa)
DNA/RNA helicase, superfamily II (EC:5.99.1.-) rbh
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
ATP-dependent RNA helicase DeaD n=1 Tax=Rhodanobacter denitrificans RepID=M4NKK8_9GAMM rbh
scnpilot_solids2_trim150_scaffold_621_30
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27197..28054)
DNA (858bp) protein (286aa)
Zinc metallopeptidase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJE4_9GAMM
Zinc metallopeptidase {ECO:0000313|EMBL:EIL87335.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative metalloprotease
Displaying items 1-30 of 67 in total

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