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scnpilot_solids2_trim150_scaffold_634

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_634_1
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(168..539)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X8Q7_NAKMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV79112.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_634_2
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(536..3700)
DNA (3165bp) protein (1055aa)
TrwC relaxase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XHE2_NAKMY
TrwC relaxase
TrwC relaxase {ECO:0000313|EMBL:ACV78348.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_634_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4533..5363)
DNA (831bp) protein (277aa)
Possible EA31 gene protein, phage lambda n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N6P7_RHOPA
EA31 gene protein phage lambda
Possible EA31 gene protein, phage lambda {ECO:0000313|EMBL:CAE28008.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
scnpilot_solids2_trim150_scaffold_634_4
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5360..6847)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM30 RepID=J2YK11_9PSED rbh
Uncharacterized protein {ECO:0000313|EMBL:GAJ30050.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
ea59: protein ea59 rbh
scnpilot_solids2_trim150_scaffold_634_5
unknown

Not on your lists

7077..7238
DNA (162bp) protein (54aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_634_6
unknown

Not on your lists

comp(7588..9357)
DNA (1770bp) protein (590aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_634_7
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(9357..10430)
DNA (1074bp) protein (358aa)
Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily n=1 Tax=Ectocarpus siliculosus RepID=D7G6A3_ECTSI
Tax=RBG_16_Planctomycetes_55_9_curated
scnpilot_solids2_trim150_scaffold_634_8
unknown

Not on your lists

comp(10427..10738)
DNA (312bp) protein (104aa)
DNA-binding protein n=1 Tax=Actinoplanes globisporus RepID=UPI000367D33C
scnpilot_solids2_trim150_scaffold_634_9
unknown

Not on your lists

11587..11685
DNA (99bp) protein (33aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_634_10
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11791..12432
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B6G2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84149.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_634_11
Propionibacterium acidipropionici, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12697..13191
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7S8L5_PROA4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV90887.1}; TaxID=1171373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM; 6432 / NBRC 12425 / NCIMB 8070).;"
scnpilot_solids2_trim150_scaffold_634_12
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13557..14948
DNA (1392bp) protein (464aa)
ABC transporter substrate-binding protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B7059C
Lactose-binding protein {ECO:0000313|EMBL:KJL33449.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
extracellular solute-binding protein; K10188 lactose/L-arabinose transport system substrate-binding protein rbh
scnpilot_solids2_trim150_scaffold_634_13
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14950..15885
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003816788
Lactose ABC transporter permease {ECO:0000313|EMBL:EYT57722.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
binding-protein-dependent transporter inner membrane component; K10189 lactose/L-arabinose transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_634_14
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15882..16742
DNA (861bp) protein (287aa)
ABC transporter permease n=1 Tax=Agromyces subbeticus RepID=UPI0003B5BD1A
Lactose transport system permease protein LacG {ECO:0000313|EMBL:KJL33451.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
binding-protein-dependent transporters inner membrane component; K10190 lactose/L-arabinose transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_634_15
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16819..18153
DNA (1335bp) protein (445aa)
ABC transporter, solute-binding protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RSX5_LEIAQ
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERK71654.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
sugar ABC transporter periplasmic protein rbh
scnpilot_solids2_trim150_scaffold_634_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18157..19101
DNA (945bp) protein (315aa)
ABC transporter permease n=1 Tax=Agromyces subbeticus RepID=UPI0003B43238 rbh
Putative transmembrane permease MsmF {ECO:0000313|EMBL:ERK71653.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
sugar ABC transporter transmembrane protein; K02025 multiple sugar transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_634_17
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19110..19955
DNA (846bp) protein (282aa)
ABC transporter, permease protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TAB2_LEIAQ rbh
ABC transporter, permease protein {ECO:0000313|EMBL:ERK71652.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
ABC transporter transmembrane permease; K02026 multiple sugar transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_634_18
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19952..21658
DNA (1707bp) protein (569aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00037029B4 rbh
Glycogen debranching protein {ECO:0000313|EMBL:EYT57720.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
glycogen debranching protein-like protein rbh
scnpilot_solids2_trim150_scaffold_634_19
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21694..22344)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KPX4_9MICO
GntR family transcriptional regulator {ECO:0000313|EMBL:KHK96222.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
GntR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_634_20
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22479..24488
DNA (2010bp) protein (670aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=359131 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomurinus.;"
beta-galactosidase (EC:3.2.1.23); K12308 beta-galactosidase [EC:3.2.1.23]
beta-galactosidase n=1 Tax=Streptomyces scabrisporus RepID=UPI000377ED66
scnpilot_solids2_trim150_scaffold_634_21
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24485..25900
DNA (1416bp) protein (472aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
glycine dehydrogenase (EC:1.4.4.2); K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] rbh
glycine dehydrogenase subunit 1 n=1 Tax=Agromyces subbeticus RepID=UPI0003B61E17
scnpilot_solids2_trim150_scaffold_634_22
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25897..27468
DNA (1572bp) protein (524aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
glycine dehydrogenase subunit 2 (EC:1.4.4.2); K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2] rbh
Glycine dehydrogenase subunit 2 (Fragment) n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2R357_LEIAQ
scnpilot_solids2_trim150_scaffold_634_23
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27465..28637
DNA (1173bp) protein (391aa)
ATP-NAD/AcoX kinase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ARM8_STRRD rbh
ATP-NAD/AcoX kinase rbh
ATP-NAD/AcoX kinase {ECO:0000313|EMBL:ACZ90368.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
scnpilot_solids2_trim150_scaffold_634_24
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28634..29404
DNA (771bp) protein (257aa)
4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 {ECO:0000313|EMBL:KJL33457.1}; EC=1.2.1.62 {ECO:0000313|EMBL:KJL33457.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000347DC52
short-chain dehydrogenase/reductase SDR
scnpilot_solids2_trim150_scaffold_634_25
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29758..30249)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003784DA3
Uncharacterized protein {ECO:0000313|EMBL:ERG64446.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
hypothetical protein
Displaying 25 items

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