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scnpilot_solids2_trim150_scaffold_649

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_649_1
Cyanobium sp. CACIAM 14, Cyanobium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2..652
DNA (651bp) protein (217aa)
Uncharacterized protein {ECO:0000313|EMBL:KEF41428.1}; TaxID=1496688 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobium.;" source="Cyanobium sp. CACIAM 14.;"
Uncharacterized protein id=3528754 bin=GWF2_Bacteroidetes_49_14 species=Cecembia lonarensis genus=Cecembia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
hypothetical protein; K07133
scnpilot_solids2_trim150_scaffold_649_2
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(990..1772)
DNA (783bp) protein (261aa)
Carboxyvinyl-carboxyphosphonatephosphorylmutase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BFA7_STRRD
carboxyvinyl-carboxyphosphonatephosphorylmutase
Carboxyvinyl-carboxyphosphonatephosphorylmutase {ECO:0000313|EMBL:ACZ88265.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
scnpilot_solids2_trim150_scaffold_649_3
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1769..2305)
DNA (537bp) protein (179aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
4-carboxymuconolactone decarboxylase domain protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D1U8_MYXXD
hypothetical protein
scnpilot_solids2_trim150_scaffold_649_4
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

2725..4635
DNA (1911bp) protein (637aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI0003667BDA
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADH65221.1}; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
scnpilot_solids2_trim150_scaffold_649_5
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5075..5581
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CE32_MYXFH
hypothetical protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
scnpilot_solids2_trim150_scaffold_649_6
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5989..9822)
DNA (3834bp) protein (1278aa)
Filamentous hemagglutinin family N-terminal domain containing protein (Fragment) n=1 Tax=Polaromonas sp. CF318 RepID=J2LZH2_9BURK
Filamentous hemagglutinin family N-terminal domain containing protein {ECO:0000313|EMBL:EJL90813.1}; Flags: Precursor; Fragment;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
collagen
scnpilot_solids2_trim150_scaffold_649_7
unknown

Not on your lists

comp(10029..10952)
DNA (924bp) protein (308aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_649_8
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11838..12899)
DNA (1062bp) protein (354aa)
Ankyrin repeat-containing protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8YZK2_9GAMM
ankyrin repeat protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
scnpilot_solids2_trim150_scaffold_649_9
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(13233..14498)
DNA (1266bp) protein (422aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3) id=14629655 bin=bin8_Chloro species=Thioalkalivibrio sp. ALSr1 genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
Tax=RBG_16_RIF_CHLX_70_13_curated
scnpilot_solids2_trim150_scaffold_649_10
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(14511..15611)
DNA (1101bp) protein (367aa)
Response regulator receiver modulated metal dependent phosphohydrolase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1ID30_9CHLR
response regulator receiver modulated metal dependent phosphohydrolase; K07814 putative two-component system response regulator
Tax=RBG_16_Armatimonadetes_67_12_curated
scnpilot_solids2_trim150_scaffold_649_11
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

15839..16522
DNA (684bp) protein (228aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NNI9_MARHT
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADR36005.1}; Flags: Precursor;; TaxID=670487 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 /; 506).;"
scnpilot_solids2_trim150_scaffold_649_12
unknown

Not on your lists

comp(17162..19027)
DNA (1866bp) protein (622aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_649_13
unknown

Not on your lists

comp(19212..19394)
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_649_14
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19618..20031)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQB6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR22271.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
PilT protein domain-containing protein
scnpilot_solids2_trim150_scaffold_649_15
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20032..20271)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037D6ED3
Uncharacterized protein {ECO:0000313|EMBL:EIJ33938.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_649_16
unknown

Not on your lists

comp(20843..20938)
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_649_17
unknown

Not on your lists

comp(20992..21294)
DNA (303bp) protein (101aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_649_18
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21620..23383
DNA (1764bp) protein (588aa)
ATP-dependent OLD family endonuclease n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A6FBFE rbh
AAA domain protein {ECO:0000313|EMBL:KCB37700.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
ATP-dependent OLD family endonuclease; K07459 putative ATP-dependent endonuclease of the OLD family rbh
scnpilot_solids2_trim150_scaffold_649_19
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23325..24893
DNA (1569bp) protein (523aa)
ATP-dependent DNA helicase n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003B411C0 rbh
Superfamily I DNA/RNA helicase-like protein {ECO:0000313|EMBL:EFI52791.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
superfamily I DNA/RNA helicase-like protein rbh
scnpilot_solids2_trim150_scaffold_649_20
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25061..25705
DNA (645bp) protein (215aa)
DNA resolvase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LAS8_9RHIZ rbh
DNA resolvase {ECO:0000313|EMBL:EIZ81654.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
DNA resolvase rbh
scnpilot_solids2_trim150_scaffold_649_21
Bacillus pseudomycoides, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25896..27050)
DNA (1155bp) protein (385aa)
5-methylcytosine-specific restriction enzyme MRR n=1 Tax=Bacillus pseudomycoides DSM 12442 RepID=C3BV54_9BACI
5-methylcytosine-specific restriction enzyme MRR {ECO:0000313|EMBL:EEM13562.1}; TaxID=527000 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus pseudomycoides DSM 12442.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_649_22
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27237..27446
DNA (210bp) protein (70aa)
Putative resolvase {ECO:0000313|EMBL:GAM02838.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
scnpilot_solids2_trim150_scaffold_649_23
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

27669..28430
DNA (762bp) protein (254aa)
signal peptidase I; K03100 signal peptidase I [EC:3.4.21.89]
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
Signal peptidase I n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CW43_TRURR
scnpilot_solids2_trim150_scaffold_649_24
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(28997..29722)
DNA (726bp) protein (242aa)
aldehyde dehydrogenase; K14519 NADP-dependent aldehyde dehydrogenase [EC:1.2.1.4]
Ketoglutarate semialdehyde dehydrogenase n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5RTK9_9PLAN
Ketoglutarate semialdehyde dehydrogenase {ECO:0000313|EMBL:EMI22635.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
scnpilot_solids2_trim150_scaffold_649_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(29809..30582)
DNA (774bp) protein (258aa)
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:CDM64748.1}; EC=1.2.1.4 {ECO:0000313|EMBL:CDM64748.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ketoglutarate semialdehyde dehydrogenase (EC:1.2.1.-); K14519 NADP-dependent aldehyde dehydrogenase [EC:1.2.1.4]
2,5-dioxovalerate dehydrogenase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B3616A
scnpilot_solids2_trim150_scaffold_649_26
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30775..32223)
DNA (1449bp) protein (483aa)
Aspartyl-tRNA(Asn) amidotransferase subunit A @ Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000313|EMBL:CDY78908.1}; EC=6.3.5.6 {ECO:0000313|EMBL:CDY78908.1};; EC=6.3.5.7 {ECO:0000313|EMBL:CDY78908.1};; Glutamyl-tRNA amidotransferase {ECO:0000313|EMBL:KDR39117.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] rbh
Amidase n=1 Tax=Serratia sp. M24T3 RepID=I0QMA4_9ENTR rbh
scnpilot_solids2_trim150_scaffold_649_27
bacterium YEK0313, Bacteria

Not on your lists

comp(32220..33179)
DNA (960bp) protein (320aa)
UDP-glucose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
NAD-dependent epimerase/dehydratase family protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CC35_9RHOB
dTDP-4-dehydro-6-deoxyglucose reductase {ECO:0000313|EMBL:CEJ10173.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
scnpilot_solids2_trim150_scaffold_649_28
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(33176..33940)
DNA (765bp) protein (255aa)
creatinine amidohydrolase; K01470 creatinine amidohydrolase [EC:3.5.2.10]
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI0002EE0BCE
Creatinine amidohydrolase {ECO:0000313|EMBL:ACM06616.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
scnpilot_solids2_trim150_scaffold_649_29
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33973..34887)
DNA (915bp) protein (305aa)
Dipeptide ABC transporter (Permease) n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CC31_9RHOB
Dipeptide ABC transporter (Permease) {ECO:0000313|EMBL:EAR50250.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 /; HTCC2516).;"
binding-protein-dependent transport systems inner membrane component
scnpilot_solids2_trim150_scaffold_649_30
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34880..35830)
DNA (951bp) protein (317aa)
ABC transporter permease protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CC32_9RHOB rbh
ABC transporter permease protein {ECO:0000313|EMBL:EAR50249.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 /; HTCC2516).;"
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein
Displaying items 1-30 of 48 in total

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