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scnpilot_solids2_trim150_scaffold_659

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_659_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..553)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NPG4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89536.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_659_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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729..1511
DNA (783bp) protein (261aa)
Putative methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WWS9_9GAMM
putative methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:AGG89535.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_659_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2067..3227
DNA (1161bp) protein (387aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM78_9GAMM
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:EIM00570.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
acyl-CoA dehydrogenase
scnpilot_solids2_trim150_scaffold_659_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3366..6545)
DNA (3180bp) protein (1060aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W601_9GAMM
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter {ECO:0000313|EMBL:EIL94892.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
scnpilot_solids2_trim150_scaffold_659_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6558..7748)
DNA (1191bp) protein (397aa)
Putative RND family acriflavine resistance protein A n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W093_9GAMM
Putative RND family acriflavine resistance protein A {ECO:0000313|EMBL:EIL92884.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
RND family efflux transporter, MFP subunit
scnpilot_solids2_trim150_scaffold_659_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8364..13304
DNA (4941bp) protein (1647aa)
NAD-specific glutamate dehydrogenase (EC:1.4.1.2)
NAD-glutamate dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM81_9GAMM
NAD-glutamate dehydrogenase {ECO:0000313|EMBL:EIM00573.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_659_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13453..14214
DNA (762bp) protein (254aa)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VRI1_9GAMM
putative sugar kinase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_659_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14260..15189
DNA (930bp) protein (310aa)
5'-nucleotidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W605_9GAMM
5'-nucleotidase {ECO:0000313|EMBL:EIL94896.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
5'-nucleotidase
scnpilot_solids2_trim150_scaffold_659_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15391..16494
DNA (1104bp) protein (368aa)
Glutaryl-CoA dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W610_9GAMM
Glutaryl-CoA dehydrogenase {ECO:0000313|EMBL:EIL94901.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
acyl-CoA dehydrogenase
scnpilot_solids2_trim150_scaffold_659_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16627..18897
DNA (2271bp) protein (757aa)
Transketolase domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W613_9GAMM
Transketolase domain-containing protein {ECO:0000313|EMBL:EIL94904.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit
scnpilot_solids2_trim150_scaffold_659_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18914..20614)
DNA (1701bp) protein (567aa)
Periplasmic/7TM domain sensor diguanylate cyclase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WM91_9GAMM
Periplasmic/7TM domain sensor diguanylate cyclase {ECO:0000313|EMBL:EIM00583.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
diguanylate cyclase (GGDEF) domain-containing protein
scnpilot_solids2_trim150_scaffold_659_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20899..21465
DNA (567bp) protein (189aa)
NADPH-dependent FMN reductase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTL8_9GAMM
NADPH-dependent FMN reductase {ECO:0000313|EMBL:EIL90559.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
NADPH-dependent FMN reductase domain-containing protein
scnpilot_solids2_trim150_scaffold_659_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21541..25164)
DNA (3624bp) protein (1208aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Transcription-repair-coupling factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W615_9GAMM
transcription-repair coupling factor Mfd
scnpilot_solids2_trim150_scaffold_659_14
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25204..25713)
DNA (510bp) protein (170aa)
Starvation-inducible outer membrane lipoprotein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKB3_9GAMM
Starvation-inducible outer membrane lipoprotein {ECO:0000313|EMBL:EIL87654.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
starvation-inducible outer membrane lipoprotein
scnpilot_solids2_trim150_scaffold_659_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25847..26743)
DNA (897bp) protein (299aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; 23S rRNA m6A2030 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Rhodanobacter denitrificans RepID=M4NEQ0_9GAMM
protein involved in catabolism of external DNA
scnpilot_solids2_trim150_scaffold_659_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26751..27680)
DNA (930bp) protein (310aa)
Integral membrane protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMC3_9GAMM
Integral membrane protein {ECO:0000313|EMBL:EIM00615.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative permease, DMT superfamily
scnpilot_solids2_trim150_scaffold_659_17
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27765..28709)
DNA (945bp) protein (315aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKC0_9GAMM
Peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:EIL87661.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
scnpilot_solids2_trim150_scaffold_659_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28952..29299
DNA (348bp) protein (116aa)
Probable S-methyl-5'-thioinosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; EC=2.4.2.44 {ECO:0000256|HAMAP-Rule:MF_01963};; 5'-methylthioinosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; Purine nucleoside phosphorylase; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
purine nucleoside phosphorylase (EC:2.4.2.28)
Probable S-methyl-5'-thioinosine phosphorylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6R8_9GAMM
Displaying 18 items

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