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scnpilot_solids2_trim150_scaffold_671

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_671_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..479
DNA (477bp) protein (159aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6P5_9GAMM
FKBP-type peptidyl-prolyl cis-trans isomerase
scnpilot_solids2_trim150_scaffold_671_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

643..1989
DNA (1347bp) protein (449aa)
UDP-glucose dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6P6_9GAMM rbh
UDP-glucose dehydrogenase {ECO:0000313|EMBL:EIL95137.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
nucleotide sugar dehydrogenase rbh
scnpilot_solids2_trim150_scaffold_671_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2004..2210
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6P7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95138.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_671_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2242..2826
DNA (585bp) protein (195aa)
Nucleoprotein/polynucleotide-associated enzyme n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6P8_9GAMM rbh
Nucleoprotein/polynucleotide-associated enzyme {ECO:0000313|EMBL:EIL95139.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_671_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2899..4980)
DNA (2082bp) protein (694aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35 4.2.1.17)
Putative enoyl-CoA hydratasee n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6P9_9GAMM rbh
Putative enoyl-CoA hydratasee {ECO:0000313|EMBL:EIL95140.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_671_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5168..5776
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Q0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL95141.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_671_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5789..8359
DNA (2571bp) protein (857aa)
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Q1_9GAMM rbh
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EIL95142.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
diguanylate cyclase (GGDEF) domain-containing protein
scnpilot_solids2_trim150_scaffold_671_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8544..9167
DNA (624bp) protein (208aa)
RNA polymerase sigma factor RpoE n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPL3_9GAMM
RNA polymerase, sigma-24 subunit, RpoE rbh
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EIM01405.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_671_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9164..9856
DNA (693bp) protein (231aa)
Negative regulator of sigma E activity n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Q3_9GAMM rbh
Negative regulator of sigma E activity {ECO:0000313|EMBL:EIL95144.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
negative regulator of sigma E activity
scnpilot_solids2_trim150_scaffold_671_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10048..11523
DNA (1476bp) protein (492aa)
Periplasmic serine protease, Do/DeqQ family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Q4_9GAMM rbh
Periplasmic serine protease, Do/DeqQ family protein {ECO:0000313|EMBL:EIL95145.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
periplasmic serine protease, Do/DeqQ family
scnpilot_solids2_trim150_scaffold_671_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11723..13516
DNA (1794bp) protein (598aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Elongation factor 4 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Q5_9GAMM rbh
GTP-binding protein LepA
scnpilot_solids2_trim150_scaffold_671_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13610..14506
DNA (897bp) protein (299aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
signal peptidase I (EC:3.4.21.89) rbh
Signal peptidase I n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Q6_9GAMM rbh
scnpilot_solids2_trim150_scaffold_671_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14693..15076
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Q7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95148.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_671_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15080..15739
DNA (660bp) protein (220aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Q8_9GAMM rbh
scnpilot_solids2_trim150_scaffold_671_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15860..16792
DNA (933bp) protein (311aa)
GTPase Era n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Q9_9GAMM rbh
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
GTP-binding protein Era rbh
scnpilot_solids2_trim150_scaffold_671_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16893..17642
DNA (750bp) protein (250aa)
DNA repair protein RecO n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6R0_9GAMM rbh
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA replication and repair protein RecO rbh
scnpilot_solids2_trim150_scaffold_671_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17639..18406)
DNA (768bp) protein (256aa)
two-component sensor/response regulator protein; K07679 two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
Two-component system regulatory protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6R1_9GAMM rbh
Two-component system regulatory protein {ECO:0000313|EMBL:EIL95152.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_671_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18431..20452
DNA (2022bp) protein (674aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6R2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL95153.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_671_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20502..21101
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6R3_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL95154.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_671_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21178..22521
DNA (1344bp) protein (448aa)
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6R4_9GAMM rbh
scnpilot_solids2_trim150_scaffold_671_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22615..23136
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6R5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL95156.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_671_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23130..24146
DNA (1017bp) protein (339aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Beta-hexosaminidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6R6_9GAMM rbh
beta-glucosidase-like glycosyl hydrolase
scnpilot_solids2_trim150_scaffold_671_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24143..24706
DNA (564bp) protein (188aa)
Hypoxanthine-guanine phosphoribosyltransferase {ECO:0000313|EMBL:EIL95158.1}; EC=2.4.2.8 {ECO:0000313|EMBL:EIL95158.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Hypoxanthine-guanine phosphoribosyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6R7_9GAMM rbh
hypoxanthine-guanine phosphoribosyltransferase
scnpilot_solids2_trim150_scaffold_671_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24861..25661
DNA (801bp) protein (267aa)
Probable S-methyl-5'-thioinosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; EC=2.4.2.44 {ECO:0000256|HAMAP-Rule:MF_01963};; 5'-methylthioinosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; Purine nucleoside phosphorylase; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
purine nucleoside phosphorylase (EC:2.4.2.28)
Probable S-methyl-5'-thioinosine phosphorylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6R8_9GAMM rbh
scnpilot_solids2_trim150_scaffold_671_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25815..26018
DNA (204bp) protein (68aa)
Cold shock protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6R9_9GAMM
Cold shock protein {ECO:0000313|EMBL:EIL95160.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cold shock protein
scnpilot_solids2_trim150_scaffold_671_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26100..27161
DNA (1062bp) protein (354aa)
N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6S0_9GAMM rbh
N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase {ECO:0000313|EMBL:EIL95161.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
asparaginase rbh
scnpilot_solids2_trim150_scaffold_671_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27174..27926
DNA (753bp) protein (251aa)
Copper homeostasis protein CutC n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6S1_9GAMM rbh
Copper homeostasis protein CutC {ECO:0000256|HAMAP-Rule:MF_00795}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
uncharacterized protein involved in copper resistance
scnpilot_solids2_trim150_scaffold_671_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28199..28951
DNA (753bp) protein (251aa)
Putative reductase UU7_03342 {ECO:0000256|HAMAP-Rule:MF_01838}; EC=1.3.1.- {ECO:0000256|HAMAP-Rule:MF_01838};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Putative reductase UU7_03342 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6S2_9GAMM
putative paraquat-inducible protein B
Displaying 28 items

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