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scnpilot_solids2_trim150_scaffold_681

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_681_1
unknown

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comp(1..84)
DNA (84bp) protein (28aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_681_2

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comp(241..1230)
DNA (990bp) protein (330aa)
Transposase IS4 family protein n=1 Tax=mine drainage metagenome RepID=T1BMR7_9ZZZZ rbh
Transposase IS4 family protein {ECO:0000313|EMBL:EQD74111.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transposase, IS4 family protein 1; K07481 transposase, IS5 family
scnpilot_solids2_trim150_scaffold_681_3
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1338..2405
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034946FE
Uncharacterized protein {ECO:0000313|EMBL:KFN42955.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
cnrT; transporter of the DMT superfamily
scnpilot_solids2_trim150_scaffold_681_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2418..3131
DNA (714bp) protein (238aa)
Type 12 methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLA9_9GAMM rbh
methylase involved in ubiquinone/menaquinone biosynthesis rbh
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGG88454.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_681_5
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3145..3828)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Kangiella aquimarina RepID=UPI000379810F
Cytochrome c, class I
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_solids2_trim150_scaffold_681_6
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3844..5217)
DNA (1374bp) protein (458aa)
Phosphate-selective porin O and P n=1 Tax=Novosphingobium sp. PP1Y RepID=F6INZ2_9SPHN rbh
phosphate-selective porin O and P rbh
Phosphate-selective porin O and P {ECO:0000313|EMBL:CCA93144.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
scnpilot_solids2_trim150_scaffold_681_7
Salinisphaera shabanensis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5494..5949)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2E7Z0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERJ19846.1}; TaxID=1033802 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera shabanensis E1L3A.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_681_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6211..6531)
DNA (321bp) protein (107aa)
Nitrogen regulatory protein P-II n=1 Tax=Rhodanobacter sp. 115 RepID=I4WGH3_9GAMM
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EIL98564.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
nitrogen regulatory protein P-II
scnpilot_solids2_trim150_scaffold_681_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6560..9721)
DNA (3162bp) protein (1054aa)
Putative silver efflux pump n=1 Tax=Rhodanobacter sp. 115 RepID=I4WGH4_9GAMM rbh
Putative silver efflux pump {ECO:0000313|EMBL:EIL98565.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative silver efflux pump; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA rbh
scnpilot_solids2_trim150_scaffold_681_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9718..11304)
DNA (1587bp) protein (529aa)
Membrane-fusion protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WGH5_9GAMM rbh
Membrane-fusion protein {ECO:0000313|EMBL:EIL98566.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
membrane-fusion protein; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB rbh
scnpilot_solids2_trim150_scaffold_681_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11301..12689)
DNA (1389bp) protein (463aa)
Outer membrane efflux protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WGH6_9GAMM rbh
Outer membrane efflux protein {ECO:0000313|EMBL:EIL98567.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
outer membrane efflux protein rbh
scnpilot_solids2_trim150_scaffold_681_12
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13776..14876
DNA (1101bp) protein (367aa)
Phospholipase D/Transphosphatidylase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VVV2_POLNA rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN52276.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
phospholipase D/transphosphatidylase rbh
scnpilot_solids2_trim150_scaffold_681_13
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(14987..15451)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI0002D26473
Uncharacterized protein {ECO:0000313|EMBL:KIF22585.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_681_14
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15472..16617)
DNA (1146bp) protein (382aa)
ackA; acetate kinase (EC:2.7.2.1); K00925 acetate kinase [EC:2.7.2.1]
Acetate kinase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EF54_BRASB
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids2_trim150_scaffold_681_15
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17100..18656)
DNA (1557bp) protein (519aa)
Phospholipase D/transphosphatidylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3Y2_9GAMM
Cardiolipin synthase {ECO:0000313|EMBL:KGM54029.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase
scnpilot_solids2_trim150_scaffold_681_16
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18709..19887)
DNA (1179bp) protein (393aa)
Major facilitator superfamily permease n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUJ0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFN47036.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
major facilitator transporter
scnpilot_solids2_trim150_scaffold_681_17
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19884..20633)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WGI0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98571.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_681_18
Leptospirillum ferriphilum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(20671..23637)
DNA (2967bp) protein (989aa)
Transposase-like protein n=1 Tax=Leptospirillum ferriphilum RepID=Q2LMN2_9BACT rbh
Transposase-like protein {ECO:0000313|EMBL:AAY85172.1}; TaxID=178606 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferriphilum.;"
transposase Tn3 family protein rbh
scnpilot_solids2_trim150_scaffold_681_19
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23804..25090)
DNA (1287bp) protein (429aa)
Arsenical pump membrane protein n=2 Tax=Alcaligenes faecalis RepID=J0ULV1_ALCFA rbh
Arsenical pump membrane protein {ECO:0000256|RuleBase:RU004993}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
arsenical pump membrane protein; K03893 arsenical pump membrane protein rbh
scnpilot_solids2_trim150_scaffold_681_20
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25092..25565)
DNA (474bp) protein (158aa)
Signal transduction protein with cbs domains n=1 Tax=Acidovorax sp. NO-1 RepID=H0BXV3_9BURK
Signal transduction protein with cbs domains {ECO:0000313|EMBL:EHL22913.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
signal transduction protein with cbs domains
scnpilot_solids2_trim150_scaffold_681_21
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25576..27336)
DNA (1761bp) protein (587aa)
arsenite-activated ATPase (arsA) (EC:3.6.3.16); K01551 arsenite-transporting ATPase [EC:3.6.3.16] rbh
Arsenite-activated ATPase (ArsA) n=1 Tax=Acidovorax sp. NO-1 RepID=H0BXV4_9BURK rbh
Arsenite-activated ATPase (ArsA) {ECO:0000313|EMBL:EHL22914.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
scnpilot_solids2_trim150_scaffold_681_22
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27357..27725)
DNA (369bp) protein (123aa)
Arsenic resistance operon trans-acting repressor ArsD n=1 Tax=Acidovorax sp. NO-1 RepID=H0BXV5_9BURK
Arsenic resistance operon trans-acting repressor ArsD {ECO:0000313|EMBL:EHL22915.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
arsenic resistance operon trans-acting repressor ArsD
scnpilot_solids2_trim150_scaffold_681_23
Leptospirillum ferriphilum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(27766..28245)
DNA (480bp) protein (160aa)
protein-tyrosine phosphatase, low molecular weight; K03741 arsenate reductase [EC:1.20.4.1] rbh
Arsenate reductase-like protein n=1 Tax=Leptospirillum ferriphilum RepID=Q2LMN7_9BACT rbh
Arsenate reductase-like protein {ECO:0000313|EMBL:AAY85167.1}; TaxID=178606 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferriphilum.;"
scnpilot_solids2_trim150_scaffold_681_24
Leptospirillum ferriphilum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

28751..29032
DNA (282bp) protein (94aa)
Resolvase-like protein n=1 Tax=Leptospirillum ferriphilum RepID=Q2LMN9_9BACT
Resolvase-like protein {ECO:0000313|EMBL:AAY85165.1}; TaxID=178606 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferriphilum.;"
tnpR; TnAtcArs resolvase
Displaying 24 items

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