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scnpilot_solids2_trim150_scaffold_684

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_684_1
unknown

Not on your lists

comp(2..103)
DNA (102bp) protein (34aa)
glucose-6-phosphate dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036F4983
scnpilot_solids2_trim150_scaffold_684_2
Bacillus hemicellulosilyticus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(157..1377)
DNA (1221bp) protein (407aa)
peptidase M20; K01295 glutamate carboxypeptidase [EC:3.4.17.11]
carboxypeptidase n=1 Tax=Bacillus coahuilensis RepID=UPI0001850EBD
Acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase and related deacylases {ECO:0000313|EMBL:GAE32227.1}; TaxID=1236971 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus hemicellulosilyticus JCM 9152.;"
scnpilot_solids2_trim150_scaffold_684_3
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1427..2593)
DNA (1167bp) protein (389aa)
Major facilitator superfamily MFS_1 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATD6_RUBXD
Major Facilitator Superfamily {ECO:0000313|EMBL:AHY45842.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
major facilitator transporter
scnpilot_solids2_trim150_scaffold_684_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2624..3910)
DNA (1287bp) protein (429aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5R0_9ARCH
acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
scnpilot_solids2_trim150_scaffold_684_5
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3915..5309)
DNA (1395bp) protein (465aa)
amidohydrolase; K01465 dihydroorotase [EC:3.5.2.3]
Dihydroorotase n=1 Tax=Rhodovulum sp. PH10 RepID=J9DX68_9RHOB
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
scnpilot_solids2_trim150_scaffold_684_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5343..6344)
DNA (1002bp) protein (334aa)
Luciferase-like, subgroup id=1794490 bin=GWD2_Deltaproteobacteria_55_8 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
luciferase-like protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
scnpilot_solids2_trim150_scaffold_684_7
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6448..7272)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4QTP4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESR23137.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
putative transport system permease abc transporter protein
scnpilot_solids2_trim150_scaffold_684_8
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7269..8072)
DNA (804bp) protein (268aa)
ABC transporter-like protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LRP8_9RHIZ
ABC transporter-like protein {ECO:0000313|EMBL:EKF20454.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
ABC transporter-like protein; K02049 NitT/TauT family transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_684_9
Streptomyces aurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8060..8842)
DNA (783bp) protein (261aa)
Putative aliphatic sulfonates transport permease protein SsuC n=1 Tax=Streptomyces aurantiacus JA 4570 RepID=S4A395_9ACTO
Putative aliphatic sulfonates transport permease protein SsuC {ECO:0000313|EMBL:EPH45175.1}; TaxID=1286094 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aurantiacus JA 4570.;"
binding-protein-dependent transporter inner membrane component; K02050 NitT/TauT family transport system permease protein
scnpilot_solids2_trim150_scaffold_684_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8839..11136)
DNA (2298bp) protein (766aa)
Putative aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein id=1794494 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured marine microorganism HF4000_ANIW93N21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria rbh
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding rbh
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
scnpilot_solids2_trim150_scaffold_684_11
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11133..11624)
DNA (492bp) protein (164aa)
ndhB; nicotine dehydrogenase small subunit (EC:1.5.99.4); K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
(2Fe-2S)-binding protein n=1 Tax=Rhodococcus opacus RepID=UPI00029CB620
Carbon monoxide dehydrogenase small chain {ECO:0000313|EMBL:AHK34667.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
scnpilot_solids2_trim150_scaffold_684_12
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11621..12418)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00037C1DE7
molybdopterin dehydrogenase, FAD-binding
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
scnpilot_solids2_trim150_scaffold_684_13
Streptomyces aurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12555..13649)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Streptomyces aurantiacus JA 4570 RepID=S3ZQU1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPH45174.1}; TaxID=1286094 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aurantiacus JA 4570.;"
ABC-type nitrate/sulfonate/bicarbonate transporter periplasmic proteins-like protein; K02051 NitT/TauT family transport system substrate-binding protein
scnpilot_solids2_trim150_scaffold_684_14
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13891..14694
DNA (804bp) protein (268aa)
Transcriptional regulator, IclR family n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZDB0_METPB
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ACB82318.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
scnpilot_solids2_trim150_scaffold_684_15
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14762..15667
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6X7F8_9MICO
Alpha/beta hydrolase {ECO:0000313|EMBL:KGN34503.1}; TaxID=1385518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
alpha/beta hydrolase fold protein
scnpilot_solids2_trim150_scaffold_684_16
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15669..17585)
DNA (1917bp) protein (639aa)
Transcriptional regulator, CdaR n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XGX8_NAKMY rbh
CdaR family transcriptional regulator rbh
Transcriptional regulator, CdaR {ECO:0000313|EMBL:ACV80209.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_684_17
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17603..18433)
DNA (831bp) protein (277aa)
3-hydroxybutyrate dehydrogenase; K00019 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] rbh
3-hydroxybutyrate dehydrogenase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XGX9_NAKMY rbh
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:ACV80210.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_684_18
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18538..19161)
DNA (624bp) protein (208aa)
Nitroreductase n=1 Tax=Streptomyces albulus CCRC 11814 RepID=S0HLU7_STRA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW99160.1}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
scnpilot_solids2_trim150_scaffold_684_19
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19119..19754)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N976_KITSK
Kitasatospora griseola strain MF730-N6 RKJC_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ61645.1}; TaxID=2064 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora griseola (Streptomyces griseolosporeus).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_684_trna_1
unknown

Not on your lists

comp(20048..20120)
DNA (73bp)
transferRNA Thr
scnpilot_solids2_trim150_scaffold_684_20
unknown

Not on your lists

comp(20165..20359)
DNA (195bp) protein (65aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_684_21
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20473..21033)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00036D79BF
LuxR family transcriptional regulator {ECO:0000313|EMBL:KHD73547.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_684_22
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21183..21734)
DNA (552bp) protein (184aa)
Transcriptional regulator, XRE family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X9Y4_NAKMY
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACV81184.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids2_trim150_scaffold_684_23
Leucobacter komagatae, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21916..28539)
DNA (6624bp) protein (2208aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI0003656F5D rbh
Leucobacter komagatae strain VKM ST2845 L_komagatae_07, whole genome shotgun sequence {ECO:0000313|EMBL:KIP52725.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
hypothetical protein
Displaying 24 items

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