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scnpilot_solids2_trim150_scaffold_689

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_689_1
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12..977)
DNA (966bp) protein (322aa)
Peptide chain release factor 2 n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZT0_9RHIZ
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein; K02836 peptide chain release factor 2
scnpilot_solids2_trim150_scaffold_689_2
unknown

Not on your lists

comp(1069..1221)
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_689_3
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1269..3686)
DNA (2418bp) protein (806aa)
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ACK49698.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ACK49698.1};; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
penicillin-binding protein (EC:2.4.1.129); K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] rbh
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000360EE52 rbh
scnpilot_solids2_trim150_scaffold_689_4
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3974..5275)
DNA (1302bp) protein (434aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7Q3S2_METSZ rbh
N-acetylmuramoyl-L-alanine amidase rbh
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CCJ06234.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
scnpilot_solids2_trim150_scaffold_689_5
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5892..8741
DNA (2850bp) protein (950aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
ribonuclease E (RNase E) (EC:3.1.4.-); K08300 ribonuclease E [EC:3.1.26.12]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036C8D86 rbh
scnpilot_solids2_trim150_scaffold_689_6
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8925..9350)
DNA (426bp) protein (142aa)
peroxiredoxin n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4760
Peroxiredoxin {ECO:0000313|EMBL:KHA76356.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
OsmC subfamily peroxiredoxin
scnpilot_solids2_trim150_scaffold_689_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9434..10678)
DNA (1245bp) protein (415aa)
Aminotransferase {ECO:0000313|EMBL:KFC70326.1}; EC=2.6.1.- {ECO:0000313|EMBL:KFC70326.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Aminotransferase class I and II n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IC36_BEII9 rbh
class I and II aminotransferase rbh
scnpilot_solids2_trim150_scaffold_689_8
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10800..12215
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IBH5_AZOC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF89069.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
scnpilot_solids2_trim150_scaffold_689_9
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12303..13076
DNA (774bp) protein (258aa)
DSBA oxidoreductase n=1 Tax=Methylosinus sp. LW4 RepID=UPI000360EA20
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:ADH88637.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
scnpilot_solids2_trim150_scaffold_689_10
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13499..13969
DNA (471bp) protein (157aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZS3_9RHIZ
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EIM29465.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
acetyl-CoA carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein
scnpilot_solids2_trim150_scaffold_689_11
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13979..15337
DNA (1359bp) protein (453aa)
Acetyl-CoA carboxylase {ECO:0000313|EMBL:KFG70456.1}; EC=6.4.1.2 {ECO:0000313|EMBL:KFG70456.1};; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
acetyl-CoA carboxylase, biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] rbh
Acetyl-CoA carboxylase, biotin carboxylase subunit n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZS2_9RHIZ rbh
scnpilot_solids2_trim150_scaffold_689_12
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15400..16080
DNA (681bp) protein (227aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
leucyltransferase (EC:2.3.2.6); K00684 leucyl/phenylalanyl-tRNA--protein transferase [EC:2.3.2.6]
leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Methylobacterium sp. 77 RepID=UPI0003703DAB
scnpilot_solids2_trim150_scaffold_689_13
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16070..16708)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IU07_METNO
hypothetical protein
Protein of unassigned function {ECO:0000313|EMBL:AIQ88065.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium oryzae CBMB20.;"
scnpilot_solids2_trim150_scaffold_689_14
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16715..17014)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q9D5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF57621.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_689_15
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17058..17468)
DNA (411bp) protein (137aa)
NADH dehydrogenase (EC:1.6.99.3); K00356 NADH dehydrogenase [EC:1.6.99.3]
NADH-ubiquinone oxidoreductase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000316460B
Uncharacterized protein {ECO:0000313|EMBL:EKS38650.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
scnpilot_solids2_trim150_scaffold_689_16
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17635..18624
DNA (990bp) protein (330aa)
Putative TRAP-type C4-dicarboxylate transport system, periplasmic component n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LDR8_RALME
C4-dicarboxylate ABC transporter substrate-binding protein
Putative TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:ABF11708.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
scnpilot_solids2_trim150_scaffold_689_17
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19089..22814
DNA (3726bp) protein (1242aa)
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] rbh
ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DB8E57 rbh
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:EIM29455.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
scnpilot_solids2_trim150_scaffold_689_18
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23088..24251
DNA (1164bp) protein (388aa)
Putative patatin-like phospholipase n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HR44_GLUDA rbh
patatin-like phospholipase rbh
Putative patatin-like phospholipase {ECO:0000313|EMBL:CAP56836.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
scnpilot_solids2_trim150_scaffold_689_19
Paracoccus sp. 10990, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24248..25285
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000364F38D rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ20838.1}; TaxID=1525716 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 10990.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_689_20
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25282..26982
DNA (1701bp) protein (567aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000372E743 rbh
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis {ECO:0000313|EMBL:EIG62892.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
ubiquitin-activating enzyme
scnpilot_solids2_trim150_scaffold_689_21
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26979..27461
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00037B0C2F
Uncharacterized protein {ECO:0000313|EMBL:EIG62891.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_689_22
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27618..28427)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Rhizobium phaseoli RepID=UPI00031AC40E rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF09040.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
Displaying 22 items

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