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scnpilot_solids2_trim150_scaffold_702

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_702_1
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1155
DNA (1155bp) protein (385aa)
TonB-dependent receptor n=1 Tax=mine drainage metagenome RepID=T1B0V5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:AHX16286.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
outer membrane receptor protein
scnpilot_solids2_trim150_scaffold_702_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1354..2763
DNA (1410bp) protein (470aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
L-glutamine synthetase (EC:6.3.1.2) rbh
Glutamine synthetase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU35_9GAMM rbh
scnpilot_solids2_trim150_scaffold_702_3
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2751..3578)
DNA (828bp) protein (276aa)
Lysophospholipase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXP0_9GAMM
Alpha/beta hydrolase {ECO:0000313|EMBL:AHX15011.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
lysophospholipase
scnpilot_solids2_trim150_scaffold_702_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3727..4584)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WET8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97979.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
EamA-like transporter family
scnpilot_solids2_trim150_scaffold_702_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4675..5577)
DNA (903bp) protein (301aa)
AraC family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY48_9GAMM
AraC family transcriptional regulator {ECO:0000313|EMBL:EIL92139.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
AraC family transcriptional regulator
scnpilot_solids2_trim150_scaffold_702_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5604..5870
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY47_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92138.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_702_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5951..6892)
DNA (942bp) protein (314aa)
Cytochrome c class I n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY52_9GAMM
Cytochrome c class I {ECO:0000313|EMBL:EIL92143.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cytochrome c
scnpilot_solids2_trim150_scaffold_702_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6889..7557)
DNA (669bp) protein (223aa)
Putative cytochrome c n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY51_9GAMM
Putative cytochrome c {ECO:0000313|EMBL:EIL92142.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative cytochrome c
scnpilot_solids2_trim150_scaffold_702_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7560..8507)
DNA (948bp) protein (316aa)
Sulfate-binding protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY50_9GAMM
Sulfate-binding protein {ECO:0000313|EMBL:EIL92141.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
extracellular solute-binding protein
scnpilot_solids2_trim150_scaffold_702_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8531..9088)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY49_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92140.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_702_11
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9290..9748
DNA (459bp) protein (153aa)
Transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEU8_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:EIL90990.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_702_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9770..11218
DNA (1449bp) protein (483aa)
NodT family efflux transporter outer membrane lipoprotein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY45_9GAMM
NodT family efflux transporter outer membrane lipoprotein {ECO:0000313|EMBL:EIL92136.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
efflux transporter, outer membrane factor lipoprotein, NodT family
scnpilot_solids2_trim150_scaffold_702_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11235..12470
DNA (1236bp) protein (412aa)
Multidrug resistance efflux pump n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VUU7_9GAMM
Multidrug resistance efflux pump {ECO:0000313|EMBL:EIL90988.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
multidrug resistance efflux pump
scnpilot_solids2_trim150_scaffold_702_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12530..14095
DNA (1566bp) protein (522aa)
EmrB/QacA subfamily drug resistance transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY43_9GAMM
EmrB/QacA subfamily drug resistance transporter {ECO:0000313|EMBL:EIL92134.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
drug resistance transporter, EmrB/QacA subfamily
scnpilot_solids2_trim150_scaffold_702_15
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14160..14720)
DNA (561bp) protein (187aa)
Lipid A 3-O-deacylase (PagL) n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VUU5_9GAMM
Lipid A 3-O-deacylase (PagL)
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_702_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14957..15553
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9N3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96174.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein; K09965 hypothetical protein
scnpilot_solids2_trim150_scaffold_702_17
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15763..17763
DNA (2001bp) protein (667aa)
X-Pro dipeptidyl-peptidase domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7L1_9GAMM
Glutaryl-7-ACA acylase {ECO:0000313|EMBL:KGI78371.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
X-Pro dipeptidyl-peptidase domain-containing protein
scnpilot_solids2_trim150_scaffold_702_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(17857..19284)
DNA (1428bp) protein (476aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037A5CEF
Mannosyl-oligosaccharide 1,2-alpha-mannosidase rbh
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
scnpilot_solids2_trim150_scaffold_702_19
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19350..20543)
DNA (1194bp) protein (398aa)
N-acylglucosamine 2-epimerase n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A3A33C
Stenotrophomonas maltophilia strain ZBG7B contig_43, whole genome shotgun sequence {ECO:0000313|EMBL:KIP85951.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
N-acyl-D-glucosamine 2-epimerase
scnpilot_solids2_trim150_scaffold_702_20
Pseudomonas alkylphenolia, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20811..21143
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2GTZ5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AIL62114.1}; TaxID=237609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alkylphenolia.;"
yegP; hypothetical protein; K09946 hypothetical protein
scnpilot_solids2_trim150_scaffold_702_21
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21169..22149)
DNA (981bp) protein (327aa)
sugar kinase; K00847 fructokinase [EC:2.7.1.4]
Sugar kinase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRR0_9GAMM rbh
Sugar kinase {ECO:0000313|EMBL:EIL89901.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_702_22
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22146..23396)
DNA (1251bp) protein (417aa)
Glucose/galactose transporter n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRR1_9GAMM
Glucose/galactose transporter {ECO:0000313|EMBL:EIL89902.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
L-fucose:H+ symporter permease
scnpilot_solids2_trim150_scaffold_702_23
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23589..25952
DNA (2364bp) protein (788aa)
Alpha-1,2-mannosidase family protein (Fragment) n=1 Tax=Rhodanobacter sp. 115 RepID=I4WB81_9GAMM
Sugar hydrolase {ECO:0000313|EMBL:KGI78424.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
alpha-1,2-mannosidase, putative
scnpilot_solids2_trim150_scaffold_702_24
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26023..26379)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003734066
Uncharacterized protein {ECO:0000313|EMBL:GAD23871.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_702_25
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26544..26948)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WN28_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN45732.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_702_26
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26976..27965)
DNA (990bp) protein (330aa)
Carboxypeptidase-like protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WET7_9GAMM
Carboxypeptidase-like protein {ECO:0000313|EMBL:EIL97978.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
carboxypeptidase C (cathepsin A)
Displaying 26 items

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