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scnpilot_solids2_trim150_scaffold_710

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_710_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..636)
DNA (636bp) protein (212aa)
Zn-finger containing NTP pyrophosphohydrolase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ04_9GAMM
Zn-finger containing NTP pyrophosphohydrolase
Zn-finger containing NTP pyrophosphohydrolase {ECO:0000313|EMBL:AGG90884.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_710_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(648..1022)
DNA (375bp) protein (125aa)
Iron-sulfur cluster insertion protein ErpA n=1 Tax=Rhodanobacter denitrificans RepID=I4WJ42_9GAMM
Iron-sulfur cluster assembly accessory protein
Iron-sulfur cluster insertion protein ErpA {ECO:0000256|HAMAP-Rule:MF_01380}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_710_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1063..1491)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFK8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98249.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Integral membrane protein CcmA involved in cell shape determination
scnpilot_solids2_trim150_scaffold_710_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1478..2233)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WJ44_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90881.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_710_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2335..2805)
DNA (471bp) protein (157aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Bacterioferritin n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFL0_9GAMM rbh
bacterioferritin
scnpilot_solids2_trim150_scaffold_710_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2932..3138)
DNA (207bp) protein (69aa)
Bacterioferritin-associated ferredoxin n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFL1_9GAMM
Bacterioferritin-associated ferredoxin {ECO:0000313|EMBL:EIL98252.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
bacterioferritin-associated ferredoxin
scnpilot_solids2_trim150_scaffold_710_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3195..3755)
DNA (561bp) protein (187aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016246}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016219};; (Di)nucleoside polyphosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
RNA pyrophosphohydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFL2_9GAMM rbh
NTP pyrophosphohydrolase rbh
scnpilot_solids2_trim150_scaffold_710_trna_1
unknown

Not on your lists

3935..4008
DNA (74bp)
transferRNA Met
scnpilot_solids2_trim150_scaffold_710_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4185..5426
DNA (1242bp) protein (414aa)
Integrase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFL3_9GAMM
Integrase {ECO:0000313|EMBL:EIL98254.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
integrase family protein
scnpilot_solids2_trim150_scaffold_710_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5480..5755
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2I0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93671.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_710_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5752..6051
DNA (300bp) protein (100aa)
Plasmid stabilization system n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2I1_9GAMM
Plasmid stabilization system {ECO:0000313|EMBL:EIL93672.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
plasmid stabilization system
scnpilot_solids2_trim150_scaffold_710_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6063..6614
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W897_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL95688.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_710_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6614..9466
DNA (2853bp) protein (951aa)
DNA methylase N-4/N-6 domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2I4_9GAMM rbh
DNA methylase N-4/N-6 domain-containing protein {ECO:0000313|EMBL:EIL93675.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
DNA methylase rbh
scnpilot_solids2_trim150_scaffold_710_13
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9478..10059
DNA (582bp) protein (194aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC56988.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
scnpilot_solids2_trim150_scaffold_710_14
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10134..11177
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM18 RepID=J3EYG2_9PSED rbh
Uncharacterized protein {ECO:0000313|EMBL:KEH07469.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_710_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11174..12940
DNA (1767bp) protein (589aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2I6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93677.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein; K06915 rbh
scnpilot_solids2_trim150_scaffold_710_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12994..13407)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W895_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95686.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_710_17
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13404..14087)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W894_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL95685.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_710_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14217..16397
DNA (2181bp) protein (727aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
UvrD/REP helicase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2I9_9GAMM rbh
UvrD/REP helicase
scnpilot_solids2_trim150_scaffold_710_19
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16571..18214)
DNA (1644bp) protein (548aa)
Uncharacterized protein {ECO:0000313|EMBL:AKC80659.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_710_20
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18211..20979)
DNA (2769bp) protein (923aa)
Helicase n=1 Tax=Thauera sp. 28 RepID=N6ZER6_9RHOO
helicase
Helicase {ECO:0000313|EMBL:ENO98409.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
scnpilot_solids2_trim150_scaffold_710_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21012..21716
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NHX6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89707.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_710_22
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22177..22800
DNA (624bp) protein (208aa)
Putative MobA/MobL family protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G2Z5_HERAR
plasmid mobilization protein
Putative MobA/MobL family protein {ECO:0000313|EMBL:CAL60882.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
scnpilot_solids2_trim150_scaffold_710_23
Serratia nematodiphila, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23347..24897)
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Klebsiella oxytoca MGH 42 RepID=V3LRR4_KLEOX
Uncharacterized protein {ECO:0000313|EMBL:KFF87007.1}; TaxID=458197 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia nematodiphila.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_710_24
unknown

Not on your lists

comp(24894..25262)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F798D4
scnpilot_solids2_trim150_scaffold_710_25
unknown

Not on your lists

comp(25259..25666)
DNA (408bp) protein (136aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_710_26
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26296..26658
DNA (363bp) protein (121aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFM6_9GAMM
queuosine biosynthesis protein QueD
scnpilot_solids2_trim150_scaffold_710_27
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26811..27200
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFM7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98268.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Phasin protein
scnpilot_solids2_trim150_scaffold_710_28
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27444..27743
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFM8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98269.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ATP synthase I chain
Displaying 29 items

View Taxonomy