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scnpilot_solids2_trim150_scaffold_731

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_731_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..96)
DNA (96bp) protein (32aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ATP synthase subunit alpha n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLS8_9GAMM
proton translocating ATP synthase, F1 alpha subunit
scnpilot_solids2_trim150_scaffold_731_2
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(308..841)
DNA (534bp) protein (178aa)
ATP synthase subunit delta n=1 Tax=Rhodanobacter denitrificans RepID=M4NTL5_9GAMM rbh
ATP synthase F1 subcomplex delta subunit rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_731_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(845..1285)
DNA (441bp) protein (147aa)
ATP synthase subunit b n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2K9_9GAMM
ATP synthase, F0 subunit b
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_731_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1334..1627)
DNA (294bp) protein (98aa)
ATP synthase F0 subcomplex C subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WMX8_9GAMM
ATP synthase F0 subcomplex C subunit
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_731_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1697..2482)
DNA (786bp) protein (262aa)
ATP synthase subunit a n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLS4_9GAMM
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
F0F1-type ATP synthase, alpha subunit
scnpilot_solids2_trim150_scaffold_731_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2486..2851)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFM8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98269.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ATP synthase I chain
scnpilot_solids2_trim150_scaffold_731_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3110..3496)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2K5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93696.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Phasin protein
scnpilot_solids2_trim150_scaffold_731_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3649..4011)
DNA (363bp) protein (121aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIF1_9GAMM
queuosine biosynthesis protein QueD
scnpilot_solids2_trim150_scaffold_731_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4732..5196
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FKC8_STRMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ46524.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
scnpilot_solids2_trim150_scaffold_731_10
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5782..6435
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MQC1_9SPHN
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
scnpilot_solids2_trim150_scaffold_731_11
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(6513..7403)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Staphylococcus vitulinus RepID=UPI0003028841
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
scnpilot_solids2_trim150_scaffold_731_12
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7517..9316)
DNA (1800bp) protein (600aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
Uncharacterized protein id=3358024 bin=GWC2_Geobacteraceae_55_20 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria rbh
UvrD/REP helicase rbh
scnpilot_solids2_trim150_scaffold_731_13
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9318..10670)
DNA (1353bp) protein (451aa)
Putative uncharacterized protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TJY9_ACIAC
hypothetical protein; K07459 putative ATP-dependent endonuclease of the OLD family
Uncharacterized protein {ECO:0000313|EMBL:ABM31277.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_solids2_trim150_scaffold_731_14
unknown

Not on your lists

10850..11263
DNA (414bp) protein (138aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_731_15
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11773..12357)
DNA (585bp) protein (195aa)
Transposase IS4 family protein n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1T9L5_BURSG
Uncharacterized protein {ECO:0000313|EMBL:KFN48514.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
transposase IS4 family protein
scnpilot_solids2_trim150_scaffold_731_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13314..13799
DNA (486bp) protein (162aa)
DNA repair protein RadC n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV19_9GAMM
DNA repair protein RadC {ECO:0000313|EMBL:EIM03311.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
DNA repair protein
scnpilot_solids2_trim150_scaffold_731_17
unknown

Not on your lists

13799..14074
DNA (276bp) protein (92aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_731_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14159..15115
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV20_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM03312.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_731_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15337..15654)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV21_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM03313.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_731_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15896..16564
DNA (669bp) protein (223aa)
Molecular chaperone DnaJ n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV22_9GAMM rbh
Molecular chaperone DnaJ {ECO:0000313|EMBL:EIM03314.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_731_21
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16588..16806
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV23_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM03315.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_731_22
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16806..17162
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV24_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM03316.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_731_23
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17300..17920
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV25_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM03317.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_731_24
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17914..18165)
DNA (252bp) protein (84aa)
Transposase, IS204/IS1001/IS1096/IS1165 family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV26_9GAMM
Transposase, IS204/IS1001/IS1096/IS1165 family protein {ECO:0000313|EMBL:EIM03318.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
transposase, IS204/IS1001/IS1096/IS1165 family protein
scnpilot_solids2_trim150_scaffold_731_25
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18503..19477
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WV27_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM03319.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_731_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19492..20388
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2J7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93688.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_731_27
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20859..21104
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UQJ3_PSEUP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AER56996.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
scnpilot_solids2_trim150_scaffold_731_28
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21107..22966
DNA (1860bp) protein (620aa)
hypothetical protein n=1 Tax=Pseudomonas psychrophila RepID=UPI00030BA1FE
Type I restriction enzyme (modification subunit)
Type I restriction enzyme (Modification subunit) {ECO:0000313|EMBL:AER56995.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
scnpilot_solids2_trim150_scaffold_731_29
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23034..25397
DNA (2364bp) protein (788aa)
N-6 DNA methylase; K03427 type I restriction enzyme M protein [EC:2.1.1.72] rbh
N-6 DNA methylase n=3 Tax=Burkholderiales RepID=F4G849_ALIDK rbh
N-6 DNA methylase {ECO:0000313|EMBL:AEB84426.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_solids2_trim150_scaffold_731_30
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25547..26815
DNA (1269bp) protein (423aa)
hypothetical protein; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] rbh
Putative uncharacterized protein n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60C34_METCA rbh
Uncharacterized protein {ECO:0000313|EMBL:AAU90501.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
Displaying items 1-30 of 53 in total

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