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scnpilot_solids2_trim150_scaffold_734

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_734_1
unknown

Not on your lists

comp(3..161)
DNA (159bp) protein (53aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_734_2
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(347..1303)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BD0AD
Nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:KGI76671.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
putative nucleoside-diphosphate-sugar epimerase
scnpilot_solids2_trim150_scaffold_734_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1393..2088
DNA (696bp) protein (232aa)
MgtC/SapB transporter n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VS21_9GAMM
MgtC/SapB transporter {ECO:0000313|EMBL:EIL90012.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
MgtC family membrane protein; K07507 putative Mg2+ transporter-C (MgtC) family protein
scnpilot_solids2_trim150_scaffold_734_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2150..2371
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WG21_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98412.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_734_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2441..3613
DNA (1173bp) protein (391aa)
Glycosyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WG20_9GAMM
Glycosyltransferase {ECO:0000313|EMBL:EIL98411.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
glycosyltransferase
scnpilot_solids2_trim150_scaffold_734_6
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3779..5089
DNA (1311bp) protein (437aa)
Lipid A core--O-antigen ligase-like protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WHN1_9GAMM
Polymerase {ECO:0000313|EMBL:GAN44928.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
lipid A core-O-antigen ligase-like enyme
scnpilot_solids2_trim150_scaffold_734_7
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5079..5858
DNA (780bp) protein (260aa)
Lipopolysaccharide core biosynthesis glycosyl transferase (KdtX) n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDH6_9GAMM rbh
Lipopolysaccharide core biosynthesis glycosyl transferase {ECO:0000313|EMBL:GAN44927.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
glycosyl transferase
scnpilot_solids2_trim150_scaffold_734_8
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5955..6872)
DNA (918bp) protein (306aa)
Lipid A biosynthesis lauroyltransferase {ECO:0000256|HAMAP-Rule:MF_01942}; EC=2.3.1.241 {ECO:0000256|HAMAP-Rule:MF_01942};; Kdo(2)-lipid IV(A) lauroyltransferase {ECO:0000256|HAMAP-Rule:MF_01942}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
Lipid A biosynthesis lauroyl acyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDV3_9GAMM
lipid A biosynthesis lauroyl/palmitoleoyl acyltransferase
scnpilot_solids2_trim150_scaffold_734_9
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7077..9053)
DNA (1977bp) protein (659aa)
ATP-dependent DNA helicase Rep {ECO:0000256|HAMAP-Rule:MF_01920}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01920};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
DNA/RNA helicase, superfamily I (EC:3.6.1.-)
ATP-dependent DNA helicase n=1 Tax=Rhodanobacter denitrificans RepID=I4WK09_9GAMM
scnpilot_solids2_trim150_scaffold_734_10
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9167..9925
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NI97_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGI79107.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_734_11
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10066..10485
DNA (420bp) protein (140aa)
peptidyl-tRNA hydrolase n=1 Tax=Dyella japonica RepID=UPI000315522A
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:AIF46529.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
protein chain release factor B
scnpilot_solids2_trim150_scaffold_734_12
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10482..11333
DNA (852bp) protein (284aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WJX4_9GAMM
Acyltransferase {ECO:0000313|EMBL:GAN45078.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase
scnpilot_solids2_trim150_scaffold_734_13
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11364..11933)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI0003687B11
Uncharacterized protein {ECO:0000313|EMBL:EJL88278.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_734_14
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12056..13120
DNA (1065bp) protein (355aa)
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:GAN45071.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
signal transduction protein id=2693609 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
diguanylate cyclase
scnpilot_solids2_trim150_scaffold_734_15
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13244..15910
DNA (2667bp) protein (889aa)
adenylate cyclase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B3B305 rbh
Adenylate cyclase {ECO:0000313|EMBL:GAN45070.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_734_16
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15907..16197)
DNA (291bp) protein (97aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN45069.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
scnpilot_solids2_trim150_scaffold_734_17
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16289..17464
DNA (1176bp) protein (392aa)
Nitroreductase n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7H1G1_XANCT rbh
Dehydrogenase {ECO:0000313|EMBL:GAN45067.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
nitroreductase rbh
scnpilot_solids2_trim150_scaffold_734_18
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17732..18601)
DNA (870bp) protein (290aa)
phhA; phenylalanine 4-monooxygenase (EC:1.14.16.1); K00500 phenylalanine-4-hydroxylase [EC:1.14.16.1] rbh
phenylalanine 4-monooxygenase n=1 Tax=Rudaea cellulosilytica RepID=UPI000368D592 rbh
Phenylalanine 4-monooxygenase {ECO:0000313|EMBL:GAN45171.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
scnpilot_solids2_trim150_scaffold_734_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18715..19458
DNA (744bp) protein (248aa)
Acetyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCK4_9GAMM
Acetyltransferase {ECO:0000313|EMBL:EIL97195.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase
scnpilot_solids2_trim150_scaffold_734_20
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19455..20513
DNA (1059bp) protein (353aa)
Putative hydrolase of the alpha/beta-hydrolase fold protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VMJ6_9GAMM
Putative hydrolase of the alpha/beta-hydrolase fold protein {ECO:0000313|EMBL:EIL88437.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
putative hydrolase of the alpha/beta-hydrolase fold protein
scnpilot_solids2_trim150_scaffold_734_21

Not on your lists

20597..22705
DNA (2109bp) protein (703aa)
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase n=1 Tax=mine drainage metagenome RepID=T1C5F7_9ZZZZ rbh
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase {ECO:0000313|EMBL:EQD61345.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_734_22
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22787..23953
DNA (1167bp) protein (389aa)
L-sorbosone dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WLV3_9GAMM
L-sorbosone dehydrogenase {ECO:0000313|EMBL:EIM00445.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
glucose/sorbosone dehydrogenase
scnpilot_solids2_trim150_scaffold_734_23
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24026..24664
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WUN2_9GAMM
Phosphatidylethanolamine-binding protein {ECO:0000313|EMBL:GAN45167.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
phospholipid-binding protein, PBP family
scnpilot_solids2_trim150_scaffold_734_24
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24694..25074
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000317E519
Uncharacterized protein {ECO:0000313|EMBL:AHX15341.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_734_25
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25108..25608
DNA (501bp) protein (167aa)
Uncharacterized protein {ECO:0000313|EMBL:KGI79254.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
scnpilot_solids2_trim150_scaffold_734_26
unknown

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25605..25862
DNA (258bp) protein (86aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_734_27
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25908..27122
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00036F49A9
Permease {ECO:0000313|EMBL:AHX15344.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
putative permease
scnpilot_solids2_trim150_scaffold_734_28
R_Gammaproteobacteria_60_43, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27179..27322)
DNA (144bp) protein (48aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI00036E3004
transposase
Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_60_43_curated
Displaying 28 items

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