ggKbase home page

scnpilot_solids2_trim150_scaffold_735

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_735_1
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


3..2597
DNA (2595bp) protein (865aa)
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9]
Valine--tRNA ligase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S5C0_PEDSD
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_735_2
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2916..3095
DNA (180bp) protein (60aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47]
GDP-mannose 4,6-dehydratase n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VI96_9SPHI
scnpilot_solids2_trim150_scaffold_735_3
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3538..3906)
DNA (369bp) protein (123aa)
Uncharacterized protein {ECO:0000313|EMBL:BAR49622.1}; TaxID=1307832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia 3313.;"
scnpilot_solids2_trim150_scaffold_735_4
BJP_IG2102_Flavobacteriales_34_12, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4189..6186
DNA (1998bp) protein (666aa)
Uncharacterized protein n=1 Tax=Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG 23171 / LMG 9086) RepID=I4A0B4_ORNRL
hypothetical protein
Tax=BJP_IG2102_Flavobacteriales_34_12
scnpilot_solids2_trim150_scaffold_735_5
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6213..7112
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis 3_1_12 RepID=E4VUU4_BACFG
Uncharacterized protein {ECO:0000313|EMBL:GAF05817.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
hypothetical protein; K07132
scnpilot_solids2_trim150_scaffold_735_6
Prevotella stercorea CAG:629, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7187..7762
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Prevotella stercorea CAG:629 RepID=R7H355_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE34109.1}; TaxID=1263103 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella stercorea CAG:629.;"
putative ATP-dependent serine protease
scnpilot_solids2_trim150_scaffold_735_7
unknown

Not on your lists

7814..7942
DNA (129bp) protein (43aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_735_8
unknown

Not on your lists

7945..8394
DNA (450bp) protein (150aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_735_9
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8499..8897
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J0F9_CYCMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEL23875.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids2_trim150_scaffold_735_10
Mycoplasma canis, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

8890..9318
DNA (429bp) protein (143aa)
Chromosomal replication initiator protein dnaA n=1 Tax=Mycoplasma canis UF33 RepID=I1A3R0_9MOLU
Chromosomal replication initiation protein {ECO:0000313|EMBL:AKF40842.1}; TaxID=29555 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma.;" source="Mycoplasma canis.;"
scnpilot_solids2_trim150_scaffold_735_11
unknown

Not on your lists

9287..9619
DNA (333bp) protein (111aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_735_12
unknown

Not on your lists

9631..9822
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_735_13
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

9827..10462
DNA (636bp) protein (212aa)
Putative uncharacterized protein id=4581079 bin=GWF2_Melioribacter_38_21 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
scnpilot_solids2_trim150_scaffold_735_14
unknown

Not on your lists

10628..11032
DNA (405bp) protein (135aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_735_15
Parcubacteria bacterium GW2011_GWD2_40_9, Parcubacteria, Bacteria

Not on your lists

11123..11884
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JNF2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKR81203.1}; TaxID=1618943 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD2_40_9.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_735_16
unknown

Not on your lists

11960..12307
DNA (348bp) protein (116aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_735_17
unknown

Not on your lists

12279..12536
DNA (258bp) protein (86aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_735_18
unknown

Not on your lists

12639..12932
DNA (294bp) protein (98aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_735_19
unknown

Not on your lists

12916..13215
DNA (300bp) protein (100aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_735_20
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13328..13747
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J0F3_CYCMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEL23869.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids2_trim150_scaffold_735_21
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13801..14220
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) RepID=G8X5I8_FLACA
Uncharacterized protein {ECO:0000313|EMBL:KEO87814.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL475.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_735_22
unknown

Not on your lists

comp(14305..14499)
DNA (195bp) protein (65aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_735_23
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14781..15299)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 RepID=U6RD69_9BACE
Uncharacterized protein {ECO:0000313|EMBL:BAR50244.1}; TaxID=1307832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia 3313.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_735_24
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15426..15851)
DNA (426bp) protein (142aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC60010.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
scnpilot_solids2_trim150_scaffold_735_25
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15939..17090)
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002EEB51E
Uncharacterized protein {ECO:0000313|EMBL:BAR50242.1}; TaxID=1307832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia 3313.;"
head morphogenesis protein SPP1 gp7
scnpilot_solids2_trim150_scaffold_735_26
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17231..18532)
DNA (1302bp) protein (434aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LTQ5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KFC60013.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
phage head morphogenesis protein, SPP1 gp7 family
scnpilot_solids2_trim150_scaffold_735_27
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18533..18955)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IZ77_CYCMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEL23856.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids2_trim150_scaffold_735_28
unknown

Not on your lists

comp(18957..19124)
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_735_29
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19153..20721)
DNA (1569bp) protein (523aa)
hypothetical protein n=1 Tax=Porphyromonas levii RepID=UPI00037813CB rbh
Uncharacterized protein {ECO:0000313|EMBL:KGO89745.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_735_30
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20725..21180)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL02T12C04 RepID=I9TFW8_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY67858.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
Displaying items 1-30 of 56 in total

View Taxonomy