ggKbase home page

scnpilot_solids2_trim150_scaffold_753

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_753_1
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..359)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037B6881
sugar transferase
Sugar transferase {ECO:0000313|EMBL:CDB08882.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
scnpilot_solids2_trim150_scaffold_753_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(423..1553)
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0003177CF5 rbh
DegT/DnrJ/EryC1/StrS aminotransferase
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
scnpilot_solids2_trim150_scaffold_753_3
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1700..2671)
DNA (972bp) protein (324aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R7P3_OWEHD rbh
nucleoside-diphosphate-sugar epimerase rbh
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AEV32396.1}; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
scnpilot_solids2_trim150_scaffold_753_4
unknown

Not on your lists

comp(2794..3174)
DNA (381bp) protein (127aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_753_5
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3158..3844)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F531_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDL00625.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_753_6
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3877..5040)
DNA (1164bp) protein (388aa)
Glycosyltransferase n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z605_BELBD rbh
glycosyltransferase rbh
Glycosyltransferase {ECO:0000313|EMBL:AFL84673.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
scnpilot_solids2_trim150_scaffold_753_7
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5136..6977)
DNA (1842bp) protein (614aa)
asparagine synthase (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] rbh
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:ADY51401.1}; EC=6.3.5.4 {ECO:0000313|EMBL:ADY51401.1};; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
Asparagine synthetase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S9P5_PEDSD rbh
scnpilot_solids2_trim150_scaffold_753_8
Caminibacter mediatlanticus, Caminibacter, Nautiliales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7067..8284)
DNA (1218bp) protein (406aa)
Glycosyl transferase, group 1 n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DEM5_9PROT
Glycosyl transferase, group 1 {ECO:0000313|EMBL:EDM22990.1}; TaxID=391592 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Nautiliales; Nautiliaceae; Caminibacter.;" source="Caminibacter mediatlanticus TB-2.;"
group 1 glycosyl transferase
scnpilot_solids2_trim150_scaffold_753_9
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

comp(8612..9982)
DNA (1371bp) protein (457aa)
Membrane protein, putative id=1907420 bin=GWE2_Bacteroidetes_29_8 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
Tax=GWE2_Bacteroidetes_29_8_curated
scnpilot_solids2_trim150_scaffold_753_10
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10010..10993)
DNA (984bp) protein (328aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEO61137.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEO61137.1};; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Bacteroides sp. 9_1_42FAA RepID=C3Q045_9BACE
family 2 glycosyl transferase
scnpilot_solids2_trim150_scaffold_753_11
Leptospira biflexa, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(11239..12399)
DNA (1161bp) protein (387aa)
glf; UDP-galactopyranose mutase; K01854 UDP-galactopyranose mutase [EC:5.4.99.9] rbh
UDP-galactopyranose mutase {ECO:0000313|EMBL:ABZ98100.1}; EC=5.4.99.9 {ECO:0000313|EMBL:ABZ98100.1};; TaxID=456481 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 /; Paris).;"
UDP-galactopyranose mutase n=1 Tax=Flavobacteriaceae bacterium S85 RepID=UPI0002559E07 rbh
scnpilot_solids2_trim150_scaffold_753_12
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(12467..13693)
DNA (1227bp) protein (409aa)
Glycosyl transferase group 1 id=4395468 bin=GWF2_Bacteroidetes_35_48 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
group 1 glycosyl transferase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_753_13
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13807..14568)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Spirulina subsalsa RepID=UPI0002FDAE64
Methyltransferase {ECO:0000313|EMBL:KFC23541.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_753_14
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14615..15694)
DNA (1080bp) protein (360aa)
Glycosyltransferase n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YZE0_AEQSU
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AFL82358.1}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
scnpilot_solids2_trim150_scaffold_753_15
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15718..16605)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI0003674C38
hypothetical protein
Tax=GWA2_Bacteroidetes_30_7_curated
scnpilot_solids2_trim150_scaffold_753_16
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16598..17851)
DNA (1254bp) protein (418aa)
Similar to capsular polysaccharide protein n=1 Tax=Oleispira antarctica RB-8 RepID=R4YLF9_OLEAN
Similar to capsular polysaccharide protein {ECO:0000313|EMBL:CCK75586.1}; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oleispira.;" source="Oleispira antarctica RB-8.;"
polysaccharide transporter
scnpilot_solids2_trim150_scaffold_753_17
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17881..18471)
DNA (591bp) protein (197aa)
Acetyltransferase (Isoleucine patch superfamily)-like protein n=1 Tax=Frankia sp. EUN1f RepID=D3CTY4_9ACTO
Acetyltransferase (Isoleucine patch superfamily)-like protein {ECO:0000313|EMBL:EFC85850.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_753_18
unknown

Not on your lists

comp(18823..18993)
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_753_19
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19019..20032)
DNA (1014bp) protein (338aa)
glycosyltransferase, group 2 family protein (EC:2.4.-.-)
Uncharacterized protein n=1 Tax=Campylobacter coli 67-8 RepID=H7UM87_CAMCO
Uncharacterized protein {ECO:0000313|EMBL:KKB53506.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
scnpilot_solids2_trim150_scaffold_753_20
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20035..21513)
DNA (1479bp) protein (493aa)
O-antigen translocase {ECO:0000313|EMBL:GAF03244.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
O-antigen translocase id=3759941 bin=GWF2_Bacteroidetes_33_38 species=Cecembia lonarensis genus=Cecembia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 rbh
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_753_21
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

comp(21522..22655)
DNA (1134bp) protein (378aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XS54_9BACT rbh
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:EHO40218.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
scnpilot_solids2_trim150_scaffold_753_22
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22652..23137)
DNA (486bp) protein (162aa)
Putative acetyltransferase {ECO:0000313|EMBL:EKB49156.1}; EC=2.3.1.- {ECO:0000313|EMBL:EKB49156.1};; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
Putative acetyltransferase n=1 Tax=Cecembia lonarensis LW9 RepID=K1L2X2_9BACT
carbonic anhydrase/acetyltransferase
scnpilot_solids2_trim150_scaffold_753_23
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23134..23535)
DNA (402bp) protein (134aa)
WxcM-like domain-containing protein n=2 Tax=Elizabethkingia anophelis RepID=H0KPH8_9FLAO
WxcM-like domain-containing protein {ECO:0000313|EMBL:ELR79269.1}; TaxID=1246994 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis R26.;"
WxcM-like domain-containing protein
scnpilot_solids2_trim150_scaffold_753_24
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

23840..24898
DNA (1059bp) protein (353aa)
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
scnpilot_solids2_trim150_scaffold_753_25
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(24922..25833)
DNA (912bp) protein (304aa)
Glycosyl transferase family 2 n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WVY4_KYRT2
family 2 glycosyl transferase; K07011
Tax=RBG_13_Ignavibacteria_36_8_curated
scnpilot_solids2_trim150_scaffold_753_26
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25845..26831)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Escherichia coli HVH 195 (3-7155360) RepID=T7TU79_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KFF03957.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
hypothetical protein
Displaying 26 items

View Taxonomy