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scnpilot_solids2_trim150_scaffold_782

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_782_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..222)
DNA (222bp) protein (74aa)
Peptide chain release factor 3 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1K6_9GAMM
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
bacterial peptide chain release factor 3 (bRF-3)
scnpilot_solids2_trim150_scaffold_782_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

508..1074
DNA (567bp) protein (189aa)
Putative manganese efflux pump MntP n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1K7_9GAMM rbh
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_782_3
unknown

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1206..1370
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_782_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1367..5545
DNA (4179bp) protein (1393aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1K8_9GAMM rbh
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EIL93349.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
multi-sensor hybrid histidine kinase rbh
scnpilot_solids2_trim150_scaffold_782_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5638..6798
DNA (1161bp) protein (387aa)
Response regulator containing a CheY-like receiver domain and an HD-GYP domain n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1K9_9GAMM rbh
Response regulator containing a CheY-like receiver domain and an HD-GYP domain {ECO:0000313|EMBL:EIL93350.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
response regulator containing a CheY-like receiver domain and an HD-GYP domain; K07814 putative two-component system response regulator rbh
scnpilot_solids2_trim150_scaffold_782_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6858..7577)
DNA (720bp) protein (240aa)
Winged helix family two component transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1L0_9GAMM rbh
Winged helix family two component transcriptional regulator {ECO:0000313|EMBL:EIL93351.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
winged helix family two component transcriptional regulator; K07667 two-component system, OmpR family, KDP operon response regulator KdpE
scnpilot_solids2_trim150_scaffold_782_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7574..9019)
DNA (1446bp) protein (482aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
osmosensitive K+ channel signal transduction histidine kinase; K07646 two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
Osmosensitive K+ channel signal transduction histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1L1_9GAMM rbh
scnpilot_solids2_trim150_scaffold_782_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9062..10939)
DNA (1878bp) protein (626aa)
Probable potassium transport system protein kup n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1L2_9GAMM rbh
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
K+ transporter
scnpilot_solids2_trim150_scaffold_782_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11208..13391)
DNA (2184bp) protein (728aa)
Elongation factor G n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1L6_9GAMM rbh
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
translation elongation factor EF-G rbh
scnpilot_solids2_trim150_scaffold_782_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13441..14052)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1L7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93358.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Xaa-Pro aminopeptidase
scnpilot_solids2_trim150_scaffold_782_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14117..14479)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1L8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93359.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_782_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14558..15298)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W148_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93189.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_782_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15693..16733
DNA (1041bp) protein (347aa)
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
homoserine acetyltransferase (EC:2.3.1.31) rbh
Homoserine O-acetyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W149_9GAMM rbh
scnpilot_solids2_trim150_scaffold_782_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16834..18024
DNA (1191bp) protein (397aa)
Cystathionine gamma-synthase {ECO:0000313|EMBL:EIL93191.1}; EC=2.5.1.48 {ECO:0000313|EMBL:EIL93191.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
O-succinylhomoserine (thiol)-lyase (EC:2.5.1.48)
Cystathionine gamma-synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W150_9GAMM rbh
scnpilot_solids2_trim150_scaffold_782_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18021..19103
DNA (1083bp) protein (361aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W151_9GAMM rbh
scnpilot_solids2_trim150_scaffold_782_16
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19339..19524
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2RTT0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KGI78543.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_782_17
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19529..22414
DNA (2886bp) protein (962aa)
Lanthionine synthetase C family protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CQG3_MYXFH rbh
Lanthionine synthetase C family protein rbh
Lanthionine synthetase C family protein {ECO:0000313|EMBL:AEI66695.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
scnpilot_solids2_trim150_scaffold_782_18
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22417..24336
DNA (1920bp) protein (640aa)
ABC transporter related protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CQG4_MYXFH rbh
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial rbh
ABC transporter related protein {ECO:0000313|EMBL:AEI66696.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
scnpilot_solids2_trim150_scaffold_782_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24440..25036)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W152_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93193.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_782_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25183..25920)
DNA (738bp) protein (246aa)
Amino acid transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W153_9GAMM
Amino acid transporter {ECO:0000313|EMBL:EIL93194.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
amino acid-polyamine-organocation superfamily protein
Displaying 20 items

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