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scnpilot_solids2_trim150_scaffold_788

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_788_1
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2..493
DNA (492bp) protein (164aa)
Cadmium resistance transporter n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HKV9_CYAP4
cadmium resistance transporter
Cadmium resistance transporter {ECO:0000313|EMBL:ACL45191.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
scnpilot_solids2_trim150_scaffold_788_2
unknown

Not on your lists

comp(590..829)
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_788_3
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2225..2878
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GW22_SPHAL
Contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KID12589.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_788_4
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2875..4803
DNA (1929bp) protein (643aa)
UPI0003D1A422 related cluster n=1 Tax=unknown RepID=UPI0003D1A422 rbh
Contig2, whole genome shotgun sequence {ECO:0000313|EMBL:ETA51220.2}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_788_5
Haematobacter massiliensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4829..6745
DNA (1917bp) protein (639aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6E5L1_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KFI25775.1}; TaxID=195105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter massiliensis.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_788_6
Mycobacterium vulneris, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6959..8680)
DNA (1722bp) protein (574aa)
Bacterial regulatory helix-turn-helix protein, lysR family n=1 Tax=Mycobacterium sp. (strain Spyr1) RepID=E6TAW5_MYCSR
Regulatory helix-turn-helix protein, lysR family {ECO:0000313|EMBL:CDO31101.1}; TaxID=547163 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium vulneris.;"
regulatory helix-turn-helix protein, lysR family
scnpilot_solids2_trim150_scaffold_788_7
unknown

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comp(8677..9864)
DNA (1188bp) protein (396aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_788_8
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9915..12128)
DNA (2214bp) protein (738aa)
Uncharacterized protein n=1 Tax=Bacillus sp. EGD-AK10 RepID=U2AQ38_9BACI
transposase
Integrase core domain protein {ECO:0000313|EMBL:KJL37231.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
scnpilot_solids2_trim150_scaffold_788_9
unknown

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comp(12125..12949)
DNA (825bp) protein (275aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_788_10
unknown

Not on your lists

13178..13498
DNA (321bp) protein (107aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_788_11
unknown

Not on your lists

13589..13780
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_788_12
unknown

Not on your lists

13823..14062
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_788_13
unknown

Not on your lists

14106..14405
DNA (300bp) protein (100aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_788_14
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

14402..14677
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Burkholderia sp. YI23 RepID=G8M6L6_9BURK
Transcriptional regulator {ECO:0000313|EMBL:AIE85260.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_788_15
unknown

Not on your lists

comp(14674..14955)
DNA (282bp) protein (94aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_788_16
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(15026..16057)
DNA (1032bp) protein (344aa)
Outer membrane efflux protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BID8_MEISD
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ADH64113.1}; Flags: Precursor;; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
scnpilot_solids2_trim150_scaffold_788_17
Eimeria tenella, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

comp(16054..17466)
DNA (1413bp) protein (471aa)
Uncharacterized protein (Fragment) n=1 Tax=Eimeria tenella RepID=U6L525_EIMTE
Uncharacterized protein {ECO:0000313|EMBL:CDJ43704.1}; Flags: Fragment;; TaxID=5802 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria tenella (Coccidian parasite).;"
oprN6; outer membrane efflux protein
scnpilot_solids2_trim150_scaffold_788_18
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17539..18321)
DNA (783bp) protein (261aa)
Macrolide export ATP-binding/permease protein MacB {ECO:0000256|HAMAP-Rule:MF_01720}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01720};; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
ABC transporter, ATP-binding protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LFN1_9FIRM
ABC-type antimicrobial peptide transport system,ATPase component
scnpilot_solids2_trim150_scaffold_788_19
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(18331..19644)
DNA (1314bp) protein (438aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EXW7_SPICH
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein
Tax=GWC1_Treponema_61_84_curated
scnpilot_solids2_trim150_scaffold_788_20
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19810..21036)
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI000363726E
hypothetical protein; K02004 putative ABC transport system permease protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE45003.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
scnpilot_solids2_trim150_scaffold_788_21
Atopobium parvulum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21036..22493)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W974_ATOPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV50662.1}; TaxID=521095 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI; 0546) (Streptococcus parvulus) (Peptostreptococcus parvulus).;"
scnpilot_solids2_trim150_scaffold_788_22
Deinococcus radiodurans, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(22493..22819)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Deinococcus wulumuqiensis RepID=UPI000347AD62
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAF11503.1}; TaxID=243230 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 /; LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422).;"
scnpilot_solids2_trim150_scaffold_788_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

22961..25450
DNA (2490bp) protein (830aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U458_9DELT
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
scnpilot_solids2_trim150_scaffold_788_24
unknown

Not on your lists

comp(25694..25897)
DNA (204bp) protein (68aa)

This feature has no annotations

Displaying 24 items

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