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scnpilot_solids2_trim150_scaffold_790

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_790_1
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..123)
DNA (123bp) protein (41aa)
methylcitrate synthase (EC:2.3.3.5); K01659 2-methylcitrate synthase [EC:2.3.3.5]
Citrate synthase n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1DAH7_LARHH
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
scnpilot_solids2_trim150_scaffold_790_2
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137..730)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036A7A5E
Uncharacterized protein {ECO:0000313|EMBL:KGQ19464.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
scnpilot_solids2_trim150_scaffold_790_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(735..1625)
DNA (891bp) protein (297aa)
Methylisocitrate lyase {ECO:0000256|RuleBase:RU361121}; EC=4.1.3.30 {ECO:0000256|RuleBase:RU361121};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
methylisocitrate lyase (EC:4.1.3.30)
2-methylisocitrate lyase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIV6_9GAMM
scnpilot_solids2_trim150_scaffold_790_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1865..3070
DNA (1206bp) protein (402aa)
Sodium:dicarboxylate symporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW49_9GAMM
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:EIL91440.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Na+/H+ dicarboxylate symporter
scnpilot_solids2_trim150_scaffold_790_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3245..5233
DNA (1989bp) protein (663aa)
Alkyl hydroperoxide reductase subunit F n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMG3_9GAMM
Alkyl hydroperoxide reductase subunit F {ECO:0000313|EMBL:EIL88404.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
alkyl hydroperoxide reductase, F subunit
scnpilot_solids2_trim150_scaffold_790_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5197..5454
DNA (258bp) protein (86aa)
Alkyl hydroperoxide reductase subunit F n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIV9_9GAMM
Alkyl hydroperoxide reductase subunit F {ECO:0000313|EMBL:EIL99400.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
alkyl hydroperoxide reductase, F subunit
scnpilot_solids2_trim150_scaffold_790_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5540..6364
DNA (825bp) protein (275aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01967}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01967};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01967}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
NAD-dependent protein deacetylase n=1 Tax=Rhodanobacter thiooxydans LCS2 PF3_9GAMM">RepID=I4WPF3_9GAMM
NAD-dependent protein deacetylase, SIR2 family
scnpilot_solids2_trim150_scaffold_790_8
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6449..6907
DNA (459bp) protein (153aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
methionine-R-sulfoxide reductase (EC:1.8.4.11); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
methionine sulfoxide reductase B n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003797377
scnpilot_solids2_trim150_scaffold_790_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6904..7431
DNA (528bp) protein (176aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWL8_9GAMM
methionine-S-sulfoxide reductase
scnpilot_solids2_trim150_scaffold_790_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7500..8063
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037922C9
Uncharacterized protein {ECO:0000313|EMBL:AHG92491.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_790_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8069..9232)
DNA (1164bp) protein (388aa)
Lipase class 3 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4R8_9GAMM
Lipase class 3 {ECO:0000313|EMBL:EIL94459.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative lipase family protein
scnpilot_solids2_trim150_scaffold_790_12
Burkholderia sp. MSHR3999, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9276..9797)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Burkholderia thailandensis MSMB121 RepID=N0ANQ3_BURTH
KY49.ctg7180000000014_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIP17851.1}; TaxID=1542965 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSHR3999.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_790_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9889..10107)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WRA7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89324.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_790_14
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10244..10600
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0U6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93087.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_790_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10713..11558
DNA (846bp) protein (282aa)
PAS/PAC sensor-containing diguanylate cyclase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWC9_9GAMM
PAS/PAC sensor-containing diguanylate cyclase {ECO:0000313|EMBL:EIL91520.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
PAS/PAC sensor-containing diguanylate cyclase
scnpilot_solids2_trim150_scaffold_790_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11672..13273)
DNA (1602bp) protein (534aa)
Sulfotransferase family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NA84_9GAMM
sulfotransferase family protein
Sulfotransferase family protein {ECO:0000313|EMBL:AGG87319.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_790_17
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13478..13957
DNA (480bp) protein (160aa)
3-demethylubiquinone-9 3-methyltransferase; K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTF2_9GAMM
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:EIL90493.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_790_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14056..14712
DNA (657bp) protein (219aa)
Glutathione S-transferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WS34_9GAMM
glutathione S-transferase
Glutathione S-transferase {ECO:0000313|EMBL:AGG89425.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_790_19
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15008..15283)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WY29_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_790_20
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15440..15670)
DNA (231bp) protein (77aa)
transcriptional regulator n=1 Tax=Streptomyces RepID=UPI0003756690
XRE family transcriptional regulator; K07727 putative transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:EQD86388.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
scnpilot_solids2_trim150_scaffold_790_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15670..16176)
DNA (507bp) protein (169aa)
Transmembrane transport protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWE4_9GAMM
Transmembrane transport protein {ECO:0000313|EMBL:EIL91535.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transmembrane transport protein
scnpilot_solids2_trim150_scaffold_790_22
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16456..16884
DNA (429bp) protein (143aa)
UPI0003CDD734 related cluster n=1 Tax=unknown RepID=UPI0003CDD734
Aldehyde-activating protein {ECO:0000313|EMBL:KJB96726.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_790_23
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17200..18762
DNA (1563bp) protein (521aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BB8E1 rbh
ankyrin rbh
Ankyrin {ECO:0000313|EMBL:ACQ78334.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
scnpilot_solids2_trim150_scaffold_790_24
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18870..19700)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0I0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL92971.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_790_25
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20315..21148
DNA (834bp) protein (278aa)
Cytochrome c peroxidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NEY6_9GAMM
cytochrome c peroxidase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_790_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21121..21354
DNA (234bp) protein (78aa)
Cytochrome c551 peroxidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WS30_9GAMM
cytochrome c peroxidase
Cytochrome c peroxidase {ECO:0000313|EMBL:AGG89430.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_790_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21463..21717)
DNA (255bp) protein (85aa)
TonB-dependent receptor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWF0_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:EIL91541.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TonB-dependent receptor
scnpilot_solids2_trim150_scaffold_790_28
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21886..22278
DNA (393bp) protein (131aa)
Glucose sorbosone dehydrogenase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTG7_9GAMM
Glucose sorbosone dehydrogenase {ECO:0000313|EMBL:EIL90508.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
glucose sorbosone dehydrogenase
scnpilot_solids2_trim150_scaffold_790_29
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22288..22722)
DNA (435bp) protein (145aa)
Rifampin ADP-ribosyl transferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTH1_9GAMM
Rifampin ADP-ribosyl transferase {ECO:0000313|EMBL:EIL90512.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
rifampin ADP-ribosyl transferase
scnpilot_solids2_trim150_scaffold_790_30
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22960..23295)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI0003754F34
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
Displaying items 1-30 of 51 in total

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