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scnpilot_solids2_trim150_scaffold_801

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_801_1
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(279..971)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GE48_LACS5
Uncharacterized protein {ECO:0000313|EMBL:KFC58768.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_801_2
unknown

Not on your lists

comp(1171..1869)
DNA (699bp) protein (233aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_801_3
unknown

Not on your lists

comp(2132..2818)
DNA (687bp) protein (229aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_801_4
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3053..3877)
DNA (825bp) protein (275aa)
Nin one binding (NOB1) Zn-ribbon like family protein n=1 Tax=Clostridium difficile CD170 RepID=T3FFB8_CLODI
VRR-NUC domain-containing protein {ECO:0000313|EMBL:EGD49550.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_801_5
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3911..4627)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029A8D11
Uncharacterized protein {ECO:0000313|EMBL:KGN97714.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivicanis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_801_6
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4861..5610)
DNA (750bp) protein (250aa)
Uncharacterized protein n=2 Tax=Riemerella anatipestifer RepID=J9R9B3_RIEAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFR36788.1}; TaxID=1228997 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer RA-CH-1.;"
scnpilot_solids2_trim150_scaffold_801_7
unknown

Not on your lists

comp(5613..6074)
DNA (462bp) protein (154aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_801_8
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6286..6879)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003792130
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV34362.1}; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
scnpilot_solids2_trim150_scaffold_801_9
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7167..7535)
DNA (369bp) protein (123aa)
Ferric siderophore transport system, periplasmic binding protein TonB n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2E6N4_9BACT
Ferric siderophore transport system, periplasmic binding protein TonB {ECO:0000313|EMBL:EPA00287.1}; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
TonB family protein
scnpilot_solids2_trim150_scaffold_801_10
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7858..8775)
DNA (918bp) protein (306aa)
WYL superfamily protein id=1794153 bin=GWD2_Bacteroidetes_40_43 species=Psychroflexus torquis genus=Psychroflexus taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63 rbh
WYL superfamily protein rbh
Tax=GWE2_Bacteroidetes_40_63_curated
scnpilot_solids2_trim150_scaffold_801_11
unknown

Not on your lists

comp(8779..9423)
DNA (645bp) protein (215aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_801_12
unknown

Not on your lists

comp(9426..9863)
DNA (438bp) protein (146aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_801_13
unknown

Not on your lists

comp(10167..10265)
DNA (99bp) protein (33aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_801_14
Acinetobacter sp. CIP-A165, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10255..11346)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. CIP-A165 RepID=N8R9X2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:ENU30907.1}; TaxID=40373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. CIP-A165.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_801_15
unknown

Not on your lists

11470..11772
DNA (303bp) protein (101aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_801_16
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(12112..15099)
DNA (2988bp) protein (996aa)
type III restriction protein res subunit; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] rbh
Restriction endonuclease, type I, EcoRI, R subunit/Type III id=2098044 bin=GWB2_Ignavibacteria_35_12 species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good rbh
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
scnpilot_solids2_trim150_scaffold_801_17
Acaryochloris sp. HICR111A, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15077..16228)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Acaryochloris sp. HICR111A RepID=I6UBX8_9CHRO
Uncharacterized protein {ECO:0000313|EMBL:AFM92597.1}; TaxID=576912 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris sp. HICR111A.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_801_18
Spongiibacter sp. IMCC21906, Spongiibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16230..17522)
DNA (1293bp) protein (431aa)
Restriction endonuclease S subunit {ECO:0000313|EMBL:AKH68802.1}; EC=3.1.21.3 {ECO:0000313|EMBL:AKH68802.1};; TaxID=1620392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Spongiibacter.;" source="Spongiibacter sp. IMCC21906.;"
restriction endonuclease S subunits-like protein; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3]
Restriction endonuclease S subunits-like protein n=1 Tax=Haemophilus haemolyticus M21639 RepID=F9H7B4_HAEHA rbh
scnpilot_solids2_trim150_scaffold_801_19
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(17522..19279)
DNA (1758bp) protein (586aa)
n-6 DNA methylase; K03427 type I restriction enzyme M protein [EC:2.1.1.72] rbh
Putative uncharacterized protein id=2098034 bin=GWB2_Ignavibacteria_35_12 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
scnpilot_solids2_trim150_scaffold_801_20
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19845..20375)
DNA (531bp) protein (177aa)
hypothetical protein, partial n=1 Tax=Pedobacter agri RepID=UPI00029A5862
Uncharacterized protein {ECO:0000313|EMBL:EDM36057.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
scnpilot_solids2_trim150_scaffold_801_21
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20564..21565)
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Acinetobacter calcoaceticus RepID=UPI000345ACF5 rbh
DNA protecting protein DprA {ECO:0000313|EMBL:CEA15403.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
SMF family protein; K04096 DNA processing protein rbh
scnpilot_solids2_trim150_scaffold_801_22
Sulfurospirillum multivorans, Sulfurospirillum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21595..22590)
DNA (996bp) protein (332aa)
Amidophosphoribosyltransferase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BV39_NITHN
Uncharacterized protein {ECO:0000313|EMBL:AHJ13271.1}; TaxID=1150621 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Sulfurospirillum.;" source="Sulfurospirillum multivorans DSM 12446.;"
amidophosphoribosyltransferase
scnpilot_solids2_trim150_scaffold_801_23
Paramecium tetraurelia, Paramecium, Peniculida, Oligohymenophorea, Eukaryota

Not on your lists

comp(22580..23392)
DNA (813bp) protein (271aa)
Chromosome undetermined scaffold_654, whole genome shotgun sequence. (Fragment) n=1 Tax=Paramecium tetraurelia RepID=A0DVF9_PARTE
hypothetical protein
Chromosome undetermined scaffold_654, whole genome shotgun sequence {ECO:0000313|EMBL:CAK87026.1}; Flags: Fragment;; TaxID=5888 species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium.;" source="Paramecium tetraurelia.;"
scnpilot_solids2_trim150_scaffold_801_24
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23403..23990)
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Prevotella oris C735 RepID=D7NG85_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CEA15401.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_801_25
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24399..24998)
DNA (600bp) protein (200aa)
Heavy metal transport/detoxification protein n=1 Tax=Galbibacter marinus RepID=K2PQQ2_9FLAO rbh
Heavy metal transporter {ECO:0000313|EMBL:KGO86689.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
heavy metal transport/detoxification protein
scnpilot_solids2_trim150_scaffold_801_26
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24995..25369)
DNA (375bp) protein (125aa)
ArsR family transcriptional regulator n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S1C7_9FLAO
Transcriptional regulator {ECO:0000313|EMBL:KGO86690.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
ArsR family transcriptional regulator
Displaying 26 items

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