ggKbase home page

scnpilot_solids2_trim150_scaffold_803

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_803_1

Not on your lists

comp(3..1451)
DNA (1449bp) protein (483aa)
peptidoglycan glycosyltransferase; K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129]
Penicillin-binding protein n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YM58_MOBAS
Uncharacterized protein {ECO:0000313|EMBL:KKN88619.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids2_trim150_scaffold_803_2
unknown

Not on your lists

comp(1474..1611)
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_803_3
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2290..2739
DNA (450bp) protein (150aa)
UPI0003CE2275 related cluster n=1 Tax=unknown RepID=UPI0003CE2275
Uncharacterized protein {ECO:0000313|EMBL:EZQ14582.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
scnpilot_solids2_trim150_scaffold_803_4
unknown

Not on your lists

comp(3105..3494)
DNA (390bp) protein (130aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_803_5
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3494..3808)
DNA (315bp) protein (105aa)
Single-strand DNA binding protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FXP6_9RHIZ
single-strand binding protein/primosomal replication protein n
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
scnpilot_solids2_trim150_scaffold_803_6
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3867..4649)
DNA (783bp) protein (261aa)
UPI0003D02629 related cluster n=1 Tax=unknown RepID=UPI0003D02629
Uncharacterized protein {ECO:0000313|EMBL:ESZ08433.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
conserved exported protein of unknown function
scnpilot_solids2_trim150_scaffold_803_7
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4656..5069
DNA (414bp) protein (138aa)
UPI0003CE20A6 related cluster n=1 Tax=unknown RepID=UPI0003CE20A6
Uncharacterized protein {ECO:0000313|EMBL:EZQ14583.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_803_8
unknown

Not on your lists

comp(5141..5338)
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_803_9
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5395..5706
DNA (312bp) protein (104aa)
UPI0003D03A5C related cluster n=1 Tax=unknown RepID=UPI0003D03A5C
Uncharacterized protein {ECO:0000313|EMBL:ESY89636.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
scnpilot_solids2_trim150_scaffold_803_10
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5703..5960)
DNA (258bp) protein (86aa)
Uncharacterized protein {ECO:0000313|EMBL:EZQ14631.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
scnpilot_solids2_trim150_scaffold_803_11
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5957..6505)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FFL6_9RHIZ
Succinoglycan biosynthesis protein exoI {ECO:0000313|EMBL:EZQ14585.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
succinoglycan biosynthesis protein ExoI-like protein
scnpilot_solids2_trim150_scaffold_803_12
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6492..7112)
DNA (621bp) protein (207aa)
UPI0003CEB89F related cluster n=1 Tax=unknown RepID=UPI0003CEB89F
Uncharacterized protein {ECO:0000313|EMBL:EXL04953.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
scnpilot_solids2_trim150_scaffold_803_13
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7354..7875
DNA (522bp) protein (174aa)
UPI0003D00809 related cluster n=1 Tax=unknown RepID=UPI0003D00809
Lytic transglycosylase {ECO:0000313|EMBL:EZQ14586.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
Membrane-bound lytic murein transglycosylase F Murein lyase F
scnpilot_solids2_trim150_scaffold_803_14
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7892..8203
DNA (312bp) protein (104aa)
UPI0003D015A5 related cluster n=1 Tax=unknown RepID=UPI0003D015A5
Conjugal transfer protein TrbC {ECO:0000313|EMBL:EXL04870.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
conjugal transfer protein trbc; K03197 type IV secretion system protein VirB2
scnpilot_solids2_trim150_scaffold_803_15
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8208..8501
DNA (294bp) protein (98aa)
UPI0003CFCD89 related cluster n=1 Tax=unknown RepID=UPI0003CFCD89
Type VI secretion protein {ECO:0000313|EMBL:EZQ14588.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
scnpilot_solids2_trim150_scaffold_803_16
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8498..10900
DNA (2403bp) protein (801aa)
Type IV secretion/conjugal transfer ATPase,VirB4 family n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FJ47_9RHIZ
Type VI secretion protein {ECO:0000313|EMBL:EXL04872.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
avhB4a; type IV secretion protein; K03199 type IV secretion system protein VirB4 rbh
scnpilot_solids2_trim150_scaffold_803_17
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10884..12038
DNA (1155bp) protein (385aa)
UPI0003CE64A9 related cluster n=1 Tax=unknown RepID=UPI0003CE64A9
Uncharacterized protein {ECO:0000313|EMBL:EXL04954.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
transglycosylase
scnpilot_solids2_trim150_scaffold_803_18
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12048..12788
DNA (741bp) protein (247aa)
UPI0003CF61F7 related cluster n=1 Tax=unknown RepID=UPI0003CF61F7
Conjugal transfer protein {ECO:0000313|EMBL:EZQ14590.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_803_19
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12789..12992
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:EZQ14634.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
scnpilot_solids2_trim150_scaffold_803_20
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12989..14041
DNA (1053bp) protein (351aa)
UPI0003CFFFD5 related cluster n=1 Tax=unknown RepID=UPI0003CFFFD5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EZQ14635.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
conjugal transfer protein; K03201 type IV secretion system protein VirB6
scnpilot_solids2_trim150_scaffold_803_21
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14116..14835
DNA (720bp) protein (240aa)
VirB8 n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FJA4_9RHIZ rbh
Type VI secretion protein {ECO:0000313|EMBL:EZQ14591.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
VirB8; K03203 type IV secretion system protein VirB8
scnpilot_solids2_trim150_scaffold_803_22
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14832..15635
DNA (804bp) protein (268aa)
UPI0003CE1D32 related cluster n=1 Tax=unknown RepID=UPI0003CE1D32
Conjugal transfer protein {ECO:0000313|EMBL:EZQ14592.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
virB; P-type conjugative transfer protein VirB9; K03204 type IV secretion system protein VirB9
scnpilot_solids2_trim150_scaffold_803_23
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15638..17107
DNA (1470bp) protein (490aa)
UPI0003CDD521 related cluster n=1 Tax=unknown RepID=UPI0003CDD521 rbh
Conjugal transfer protein TrbI {ECO:0000313|EMBL:EZQ14593.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
conjugal transfer protein; K03195 type IV secretion system protein VirB10
scnpilot_solids2_trim150_scaffold_803_24
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17104..18129
DNA (1026bp) protein (342aa)
UPI0003CED436 related cluster n=1 Tax=unknown RepID=UPI0003CED436
Type VI secretion protein {ECO:0000313|EMBL:EXL04877.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
type II secretion system protein E; K03196 type IV secretion system protein VirB11
scnpilot_solids2_trim150_scaffold_803_25
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18146..20320
DNA (2175bp) protein (725aa)
UPI0003CE343C related cluster n=1 Tax=unknown RepID=UPI0003CE343C
Uncharacterized protein {ECO:0000313|EMBL:EXL04957.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
TRAG family protein; K03205 type IV secretion system protein VirD4
scnpilot_solids2_trim150_scaffold_803_26
unknown

Not on your lists

20369..20569
DNA (201bp) protein (67aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_803_27
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20583..22841)
DNA (2259bp) protein (753aa)
UPI0003CFDB70 related cluster n=1 Tax=unknown RepID=UPI0003CFDB70 rbh
Uncharacterized protein {ECO:0000313|EMBL:EZQ14637.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_803_28
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22838..23353)
DNA (516bp) protein (172aa)
UPI0003D06969 related cluster n=1 Tax=unknown RepID=UPI0003D06969
Uncharacterized protein {ECO:0000313|EMBL:ESZ08399.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_803_29
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23694..24374
DNA (681bp) protein (227aa)
Putative ParA-like protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FJH4_9RHIZ
Putative ParA-like protein {ECO:0000313|EMBL:CCV16338.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
partitioning protein, ATPase; K03496 chromosome partitioning protein
scnpilot_solids2_trim150_scaffold_803_30
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24371..24781
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7F7G8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX59593.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
Displaying items 1-30 of 34 in total

View Taxonomy