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scnpilot_solids2_trim150_scaffold_806

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_806_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..733)
DNA (732bp) protein (244aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
3-isopropylmalate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXX8_9GAMM
3-isopropylmalate dehydrogenase
scnpilot_solids2_trim150_scaffold_806_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(730..1311)
DNA (582bp) protein (194aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
3-isopropylmalate dehydratase small subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXX9_9GAMM rbh
3-isopropylmalate dehydratase, small subunit rbh
scnpilot_solids2_trim150_scaffold_806_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1463..2872)
DNA (1410bp) protein (470aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
3-isopropylmalate dehydratase large subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXY0_9GAMM rbh
3-isopropylmalate dehydratase, large subunit rbh
scnpilot_solids2_trim150_scaffold_806_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2872..3822)
DNA (951bp) protein (317aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EIL92072.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EIL92072.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
branched chain amino acid aminotransferase apoenzyme (EC:2.6.1.42)
Branched-chain amino acid aminotransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXY1_9GAMM rbh
scnpilot_solids2_trim150_scaffold_806_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3819..5417)
DNA (1599bp) protein (533aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXY2_9GAMM rbh
scnpilot_solids2_trim150_scaffold_806_6
unknown

Not on your lists

5526..5720
DNA (195bp) protein (65aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_806_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5843..6310)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003483AE2
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_806_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6526..7857)
DNA (1332bp) protein (444aa)
Threonine synthase {ECO:0000313|EMBL:EIL92074.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EIL92074.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Threonine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXY3_9GAMM rbh
threonine synthase
scnpilot_solids2_trim150_scaffold_806_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7854..8846)
DNA (993bp) protein (331aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
homoserine kinase (EC:2.7.1.39)
Homoserine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXY4_9GAMM rbh
scnpilot_solids2_trim150_scaffold_806_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8843..9943)
DNA (1101bp) protein (367aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXY5_9GAMM rbh
scnpilot_solids2_trim150_scaffold_806_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10393..11148
DNA (756bp) protein (252aa)
Cytochrome c n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXY6_9GAMM rbh
Cytochrome c {ECO:0000313|EMBL:EIL92077.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cytochrome c553
scnpilot_solids2_trim150_scaffold_806_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11145..12437
DNA (1293bp) protein (431aa)
Cytochrome c, class I n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXY7_9GAMM rbh
Cytochrome c, class I {ECO:0000313|EMBL:EIL92078.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cytochrome c, mono- and diheme variants family rbh
scnpilot_solids2_trim150_scaffold_806_13
unknown

Not on your lists

12480..13277
DNA (798bp) protein (266aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_806_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13243..13653
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQM8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89519.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_806_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13900..14202
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQM9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89520.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_806_16
unknown

Not on your lists

14322..14570
DNA (249bp) protein (83aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_806_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14966..16993)
DNA (2028bp) protein (676aa)
5'-nucleotidase domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7H2_9GAMM rbh
5'-nucleotidase domain-containing protein {ECO:0000313|EMBL:EIL95413.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
5'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase rbh
scnpilot_solids2_trim150_scaffold_806_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17176..18888
DNA (1713bp) protein (571aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7H1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL95412.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phosphoglycerol transferase family protein, alkaline phosphatase superfamily
scnpilot_solids2_trim150_scaffold_806_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19011..19268
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7H0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95411.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_806_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19353..20099
DNA (747bp) protein (249aa)
Putative transmembrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7G9_9GAMM rbh
Putative transmembrane protein {ECO:0000313|EMBL:EIL95410.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_806_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20096..21364
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7G8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL95409.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
sterol desaturase
scnpilot_solids2_trim150_scaffold_806_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21434..23932)
DNA (2499bp) protein (833aa)
TonB-dependent receptor, plug n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7G7_9GAMM rbh
TonB-dependent receptor, plug {ECO:0000313|EMBL:EIL95408.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TonB-dependent receptor, plug
scnpilot_solids2_trim150_scaffold_806_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24130..25323
DNA (1194bp) protein (398aa)
Amino acid transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7G6_9GAMM rbh
Amino acid transporter {ECO:0000313|EMBL:EIL95407.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
amino acid transporter rbh
Displaying 23 items

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