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scnpilot_solids2_trim150_scaffold_836

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_836_1
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3..689
DNA (687bp) protein (229aa)
Peptide chain release factor 3 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDB6_NIAKG
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
peptide chain release factor 3 (bRF-3); K02837 peptide chain release factor 3
scnpilot_solids2_trim150_scaffold_836_2
unknown

Not on your lists

comp(703..873)
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_836_3
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1065..2408)
DNA (1344bp) protein (448aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Adenylosuccinate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] rbh
Adenylosuccinate lyase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDB4_NIAKG rbh
scnpilot_solids2_trim150_scaffold_836_4
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2590..3366
DNA (777bp) protein (259aa)
ddhA; glucose-1-phosphate cytidylyltransferase; K00978 glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] rbh
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003822740 rbh
Glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:KIA93831.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
scnpilot_solids2_trim150_scaffold_836_5
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3360..4436
DNA (1077bp) protein (359aa)
CDP-glucose 4,6-dehydratase; K01709 CDP-glucose 4,6-dehydratase [EC:4.2.1.45] rbh
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003716083 rbh
CDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:ACT95803.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_836_6
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4433..4981
DNA (549bp) protein (183aa)
dTDP-4-dehydrorhamnose 3,5-epimerase; K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:AEE53272.1}; EC=5.1.3.13 {ECO:0000313|EMBL:AEE53272.1};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000378912A
scnpilot_solids2_trim150_scaffold_836_7
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4985..6214
DNA (1230bp) protein (410aa)
C-methyltransferase (EC:2.1.1.-)
C-methyltransferase {ECO:0000313|EMBL:CCH03465.1}; EC=2.1.1.- {ECO:0000313|EMBL:CCH03465.1};; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000365A4B3 rbh
scnpilot_solids2_trim150_scaffold_836_8

Not on your lists

6218..7075
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035FB788 rbh
Marine sediment metagenome DNA, contig: S03H2_C02756 {ECO:0000313|EMBL:GAH30786.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
NAD-dependent epimerase/dehydratase
scnpilot_solids2_trim150_scaffold_836_9
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7068..7802
DNA (735bp) protein (245aa)
Rhamnosyl O-methyltransferase n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KH59_9BACT rbh
Rhamnosyl O-methyltransferase rbh
Rhamnosyl O-methyltransferase {ECO:0000313|EMBL:CCH03462.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
scnpilot_solids2_trim150_scaffold_836_10
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

7803..8771
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036775A9
Glycosyl transferase {ECO:0000313|EMBL:KIE09692.1}; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
glycosyl transferase family protein
scnpilot_solids2_trim150_scaffold_836_11
unknown

Not on your lists

comp(8784..9233)
DNA (450bp) protein (150aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_836_12

Not on your lists

9522..10514
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036B12D8 rbh
Family 2 glycosyl transferase {ECO:0000313|EMBL:EKD44456.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
glycosyl transferase family protein
scnpilot_solids2_trim150_scaffold_836_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10534..11715)
DNA (1182bp) protein (394aa)
Glycosyl transferase group 1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDB8_NIAKG rbh
group 1 glycosyl transferase rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:AEV99358.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_836_14
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(11870..12193)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B54680
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
scnpilot_solids2_trim150_scaffold_836_15
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(12177..12407)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI00035E3E19
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
scnpilot_solids2_trim150_scaffold_836_16
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12489..15017)
DNA (2529bp) protein (843aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036DDD66
Uncharacterized protein {ECO:0000313|EMBL:GAO43712.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_836_17
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15278..15736)
DNA (459bp) protein (153aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO41204.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
scnpilot_solids2_trim150_scaffold_836_18
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15967..17376
DNA (1410bp) protein (470aa)
Nucleoside recognition domain-containing protein n=2 Tax=Elizabethkingia anophelis RepID=H0KR33_9FLAO
Spore maturation protein {ECO:0000313|EMBL:KIA90100.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_836_19
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17476..18468
DNA (993bp) protein (331aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11PB9_CYTH3 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABG60744.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
scnpilot_solids2_trim150_scaffold_836_20
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18519..19874)
DNA (1356bp) protein (452aa)
pyridoxal-5'-phosphate-dependent protein subunit beta; K01697 cystathionine beta-synthase [EC:4.2.1.22]
Cystathionine beta-synthase n=1 Tax=Niabella soli DSM 19437 RepID=H1NK06_9SPHI
Cystathionine beta-synthase {ECO:0000313|EMBL:AHF14057.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_solids2_trim150_scaffold_836_21
unknown

Not on your lists

comp(19972..20154)
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000379FFB7
scnpilot_solids2_trim150_scaffold_836_22
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20413..22035)
DNA (1623bp) protein (541aa)
carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003749ED0
Carboxyl-terminal protease {ECO:0000313|EMBL:KIC91389.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_solids2_trim150_scaffold_836_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22098..22949
DNA (852bp) protein (284aa)
N-acetylglucosamine kinase-like protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NK04_9SPHI
ATPase {ECO:0000313|EMBL:AHF14059.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
N-acetylglucosamine kinase-like protein
scnpilot_solids2_trim150_scaffold_836_24
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23136..23420)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002D8CB49
hypothetical protein
Rhodanese-like domain protein {ECO:0000313|EMBL:EPR67115.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
scnpilot_solids2_trim150_scaffold_836_25
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23374..24747)
DNA (1374bp) protein (458aa)
Metallo-beta-lactamase/rhodanese-like domain-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHS0_FLUTR rbh
metallo-beta-lactamase/rhodanese-like domain-containing protein rbh
Metallo-beta-lactamase/rhodanese-like domain-containing protein {ECO:0000313|EMBL:AEA44848.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
Displaying 25 items

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