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scnpilot_solids2_trim150_scaffold_851

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_851_1
unknown

Not on your lists

comp(839..1609)
DNA (771bp) protein (257aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_851_2
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1611..2600)
DNA (990bp) protein (330aa)
Phage integrase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7G4_NITMU rbh
Phage integrase rbh
Phage integrase {ECO:0000313|EMBL:ABB75307.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids2_trim150_scaffold_851_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2872..3192)
DNA (321bp) protein (107aa)
Putative transcriptional regulator, CopG family n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y7G3_NITMU
CopG family transcriptional regulator
Putative transcriptional regulator, CopG family {ECO:0000313|EMBL:ABB75308.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids2_trim150_scaffold_851_4
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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3325..3615
DNA (291bp) protein (97aa)
Prevent-host-death family protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QE23_9CYAN
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:AGY57212.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
scnpilot_solids2_trim150_scaffold_851_5
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

3612..4025
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QEB1_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY57213.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
scnpilot_solids2_trim150_scaffold_851_6
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4344..4955)
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y6C3_LEPCP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB34759.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
scnpilot_solids2_trim150_scaffold_851_7

Not on your lists

comp(4927..5391)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y566_NITMU
Marine sediment metagenome DNA, contig: S12H4_C00127 {ECO:0000313|EMBL:GAI59947.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_851_8
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5601..6257)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9T9_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB74482.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids2_trim150_scaffold_851_9
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6376..7617)
DNA (1242bp) protein (414aa)
putative sensor/response regulator hybrid (EC:2.7.3.-)
histidine kinase n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00036F880A
Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
scnpilot_solids2_trim150_scaffold_851_10
unknown

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comp(7856..7987)
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_851_11
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8071..8280)
DNA (210bp) protein (70aa)
Cold-shock DNA-binding protein family n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAS6_NITMU
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family)
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:ABB74145.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids2_trim150_scaffold_851_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8453..9112)
DNA (660bp) protein (220aa)
Channel protein, hemolysin III family n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAS7_NITMU rbh
hemolysin III family channel protein; K11068 hemolysin III rbh
Channel protein, hemolysin III family {ECO:0000313|EMBL:ABB74144.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids2_trim150_scaffold_851_13
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9504..9977)
DNA (474bp) protein (158aa)
Small heat shock protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DVV9_9PROT
Small heat shock protein {ECO:0000313|EMBL:CCU63470.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
heat shock protein Hsp20; K13993 HSP20 family protein
scnpilot_solids2_trim150_scaffold_851_14
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10578..11090
DNA (513bp) protein (171aa)
Putative heat shock protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKR9_9PROT
heat shock protein Hsp20; K13993 HSP20 family protein
Putative heat shock protein {ECO:0000313|EMBL:CCU63467.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
scnpilot_solids2_trim150_scaffold_851_15
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11152..11706)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00036D428C
Site-specific recombinase {ECO:0000313|EMBL:EHP37646.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
tnpR; resolvase, essential for transposition
scnpilot_solids2_trim150_scaffold_851_16
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

12387..13814
DNA (1428bp) protein (476aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. C RepID=D9VLY8_9ACTO rbh
hypothetical protein
Tax=RBG_16_Armatimonadetes_67_12_curated
scnpilot_solids2_trim150_scaffold_851_17
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

13811..18013
DNA (4203bp) protein (1401aa)
Tetratricopeptide repeat family protein n=1 Tax=Microcystis aeruginosa DIANCHI905 RepID=L8NVY7_MICAE
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:ELS48029.1}; TaxID=1235808 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa DIANCHI905.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_851_18
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18258..18557)
DNA (300bp) protein (100aa)
DEAD/DEAH box helicase n=1 Tax=Desulfovibrio sp. Dsv1 RepID=UPI00039A7A6E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG70911.1}; TaxID=1286640 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain Sm2011 / Rm2011 / 2011).;"
scnpilot_solids2_trim150_scaffold_851_19
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18591..21290)
DNA (2700bp) protein (900aa)
hypothetical protein n=1 Tax=Burkholderia pseudomallei RepID=UPI00016AEEFD rbh
Uncharacterized protein {ECO:0000313|EMBL:CCG39438.1}; TaxID=1156940 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. mangiferaeindicae LMG 941.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_851_20
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21294..22301)
DNA (1008bp) protein (336aa)
ATPase AAA n=1 Tax=Burkholderia pseudomallei RepID=UPI00016AEBE3 rbh
AAA ATPase {ECO:0000313|EMBL:EKQ62240.1}; TaxID=1127439 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. malvacearum str. GSPB2388.;"
AAA ATPase
scnpilot_solids2_trim150_scaffold_851_21
unknown

Not on your lists

comp(22318..22437)
DNA (120bp) protein (40aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_851_22
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22434..22679)
DNA (246bp) protein (82aa)
XRE family transcriptional regulator n=1 Tax=Xanthomonas axonopodis pv. malvacearum str. GSPB2388 RepID=K8G422_9XANT
XRE family transcriptional regulator {ECO:0000313|EMBL:EKQ62241.1}; TaxID=1127439 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. malvacearum str. GSPB2388.;"
XRE family transcriptional regulator; K07726 putative transcriptional regulator
scnpilot_solids2_trim150_scaffold_851_23
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23350..23784)
DNA (435bp) protein (145aa)
ParB-like nuclease n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFJ3_9PROT
WGS project CAUA00000000 data, contig 1 {ECO:0000313|EMBL:CCU61012.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
ParB-like nuclease; K03497 chromosome partitioning protein, ParB family
Displaying 23 items

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