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scnpilot_solids2_trim150_scaffold_857

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_857_1
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2108..3514
DNA (1407bp) protein (469aa)
sialate O-acetylesterase (EC:3.1.1.53) rbh
Sialate O-acetylesterase {ECO:0000313|EMBL:ACU04414.1}; EC=3.1.1.53 {ECO:0000313|EMBL:ACU04414.1};; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000368ADBF rbh
scnpilot_solids2_trim150_scaffold_857_2
Virgibacillus sp. SK37, Virgibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3714..4166
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Virgibacillus halodenitrificans RepID=UPI0002D5EE10
Uncharacterized protein {ECO:0000313|EMBL:AIF42287.1}; TaxID=403957 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Virgibacillus.;" source="Virgibacillus sp. SK37.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_857_3
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4229..5320
DNA (1092bp) protein (364aa)
Acyltransferase 3 n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y3A7_PEDHD rbh
acyltransferase 3 rbh
Acyltransferase 3 {ECO:0000313|EMBL:ACU05332.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_857_4
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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5449..6369
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000367D7FF rbh
Xylose isomerase domain-containing protein TIM barrel
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AFK01874.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
scnpilot_solids2_trim150_scaffold_857_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6464..8701
DNA (2238bp) protein (746aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000365859B rbh
Hydrolase {ECO:0000313|EMBL:AHF16462.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_857_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8765..9409)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035F526B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03509.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_857_7
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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comp(9466..9909)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003642834
hypothetical protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
scnpilot_solids2_trim150_scaffold_857_8
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(9982..11001)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000372885A rbh
hypothetical protein; K02067 putative ABC transport system substrate-binding protein
Mammalian cell entry related domain protein {ECO:0000313|EMBL:ACU62712.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_857_9
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(11005..11781)
DNA (777bp) protein (259aa)
organic solvent ABC transporter ATP-binding protein n=1 Tax=Segetibacter koreensis RepID=UPI0003729400 rbh
Organic solvent ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEQ28439.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
sulfate-transporting ATPase; K02065 putative ABC transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_857_10
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(11781..12572)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036109D2 rbh
organic solvents resistance ABC transporter permease rbh
ABC-type transport system involved in resistance to organic solvents, permease component {ECO:0000313|EMBL:AFL84911.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
scnpilot_solids2_trim150_scaffold_857_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12734..13021
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7Z9_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96937.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_857_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13027..13476)
DNA (450bp) protein (150aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Peptide methionine sulfoxide reductase msrB; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Niabella soli DSM 19437 RepID=H1NS76_9SPHI
scnpilot_solids2_trim150_scaffold_857_13
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13642..14232
DNA (591bp) protein (197aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibac
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037E85A0
scnpilot_solids2_trim150_scaffold_857_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14237..16138)
DNA (1902bp) protein (634aa)
von Willebrand factor type A n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XYE6_PEDHD
Uncharacterized protein {ECO:0000313|EMBL:KIC93154.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
von Willebrand factor A; K07114 uncharacterized protein
scnpilot_solids2_trim150_scaffold_857_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16330..16797
DNA (468bp) protein (156aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQS7_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEV96811.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_857_16
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16801..17937
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I8XM44_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY51955.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_857_17
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18017..20302)
DNA (2286bp) protein (762aa)
sodium:proton antiporter n=1 Tax=Niabella aurantiaca RepID=UPI000360D062
Sodium:proton antiporter {ECO:0000313|EMBL:KIC96202.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
potassium/proton antiporter RosB; K03455 monovalent cation:H+ antiporter-2, CPA2 family
scnpilot_solids2_trim150_scaffold_857_18
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20367..21101)
DNA (735bp) protein (245aa)
6-phosphogluconolactonase; K01057 6-phosphogluconolactonase [EC:3.1.1.31]
6-phosphogluconolactonase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSU0_CHIPD
6-phosphogluconolactonase {ECO:0000313|EMBL:ACU58979.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_857_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21102..22664)
DNA (1563bp) protein (521aa)
glucose-6-phosphate 1-dehydrogenase; K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49]
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG89_NIAKG
scnpilot_solids2_trim150_scaffold_857_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22718..24127)
DNA (1410bp) protein (470aa)
6-phosphogluconate dehydrogenase; K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44]
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG90_NIAKG
Displaying 20 items

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