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scnpilot_solids2_trim150_scaffold_861

Search features with annotation key words

Displaying items 31-52 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_861_31
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25887..27227
DNA (1341bp) protein (447aa)
Conjugation TrbI-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH5_NITHX rbh
conjugation TrbI-like protein; K03195 type IV secretion system protein VirB10 rbh
Conjugation TrbI-like protein {ECO:0000313|EMBL:ABE65022.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
scnpilot_solids2_trim150_scaffold_861_32
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27190..28248
DNA (1059bp) protein (353aa)
Type II secretion system protein E n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH6_NITHX
Bradyrhizobium elkanii strain UASWS1015 Contig146, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53308.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
type II secretion system protein E; K03196 type IV secretion system protein VirB11
scnpilot_solids2_trim150_scaffold_861_33
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28226..30370
DNA (2145bp) protein (715aa)
Trag protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK53_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig146, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53307.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
virD4; type IV secretion protein VirD4; K03205 type IV secretion system protein VirD4
scnpilot_solids2_trim150_scaffold_861_34
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30604..31173
DNA (570bp) protein (190aa)
Probable adenylate class-3/4/guanylyl cyclase {ECO:0000313|EMBL:CCE98603.1}; EC=4.6.1.1 {ECO:0000313|EMBL:CCE98603.1};; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
Probable adenylate class-3/4/guanylyl cyclase n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AC24_RHIFH
adenylate class-3/4/guanylyl cyclase
scnpilot_solids2_trim150_scaffold_861_35
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31426..31659)
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BR56_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08300.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_861_36
unknown

Not on your lists

comp(32087..32185)
DNA (99bp) protein (33aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_861_37
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32200..33099)
DNA (900bp) protein (300aa)
Cobalt-zinc-cadmium resistance protein CzcD n=2 Tax=Oligotropha carboxidovorans RepID=B6JHP8_OLICO rbh
czcD1; cobalt-zinc-cadmium resistance protein CzcD; K03295 cation efflux system protein, CDF family rbh
Cobalt-zinc-cadmium resistance protein CzcD {ECO:0000313|EMBL:AEI06331.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_861_38
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33101..33958)
DNA (858bp) protein (286aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK84_OLICO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI08281.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_861_39
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34451..34732)
DNA (282bp) protein (94aa)
Type IV pilus assembly PilZ n=2 Tax=Oligotropha carboxidovorans RepID=B6JK86_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08279.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_861_40
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34745..35059)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HCP1_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig126, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53988.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_861_41
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35090..37261)
DNA (2172bp) protein (724aa)
zntA; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase ZntA; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5] rbh
Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase ZntA n=2 Tax=Oligotropha carboxidovorans RepID=F8BR34_OLICM rbh
Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase ZntA {ECO:0000313|EMBL:AEI08278.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_861_42
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37304..37753)
DNA (450bp) protein (150aa)
Methionyl-tRNA formyltransferase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GXK4_9BRAD
Methionyl-tRNA formyltransferase {ECO:0000313|EMBL:ERF82232.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_861_43
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37781..38152)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HCN6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF82231.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_861_44
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38149..41370)
DNA (3222bp) protein (1074aa)
Cation efflux system protein CzcA n=2 Tax=Oligotropha carboxidovorans RepID=B6JK90_OLICO rbh
Cation efflux system protein CzcA {ECO:0000313|EMBL:AEI08276.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
CzcA family heavy metal efflux pump; K07239 heavy-metal exporter, HME family rbh
scnpilot_solids2_trim150_scaffold_861_45
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41636..42583)
DNA (948bp) protein (316aa)
Membrane fusion protein, putative cation efflux system protein CzcB, RND family n=2 Tax=Oligotropha carboxidovorans RepID=B6JK92_OLICO rbh
czcB1; putative cation efflux system membrane fusion protein CzcB rbh
Membrane fusion protein, putative cation efflux system protein CzcB, RND family {ECO:0000313|EMBL:AEI08274.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_861_46
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42580..43851)
DNA (1272bp) protein (424aa)
Outer membrane efflux protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK93_OLICO rbh
Bradyrhizobium elkanii strain UASWS1015 Contig141, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53518.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
czcC1; putative cobalt-zinc-cadmium resistance outer membrane efflux protein CzcC; K15725 cobalt-zinc-cadmium resistance protein CzcC rbh
scnpilot_solids2_trim150_scaffold_861_47
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43910..44290)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NXJ9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32160.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_861_48
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44701..45303)
DNA (603bp) protein (201aa)
Putative methyltransferase n=2 Tax=Oligotropha carboxidovorans RepID=F8BR38_OLICM
putative methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:AEI08282.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_861_49
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45496..45876)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI00034659F9
regulatory protein ArsR; K03892 ArsR family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
scnpilot_solids2_trim150_scaffold_861_50
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46053..47243
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZCI6_METPB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACB82235.1}; Flags: Precursor;; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
scnpilot_solids2_trim150_scaffold_861_51
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47505..48044
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZAP8_9CAUL
Putative membrane protein {ECO:0000313|EMBL:KGB54693.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_861_52
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48284..49621)
DNA (1338bp) protein (446aa)
Iron permease FTR1 n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SUW0_CAUSK
Cytochrome c, class I {ECO:0000313|EMBL:GAM99005.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
iron permease FTR1; K07243 high-affinity iron transporter
Displaying items 31-52 of 52 in total

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