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scnpilot_solids2_trim150_scaffold_861

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_861_1
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..753)
DNA (753bp) protein (251aa)
Chromosome partitioning protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK27_OLICO
ParB-like domain-containing protein
ParB-like domain protein {ECO:0000313|EMBL:AEI08338.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_861_2
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1011..6113)
DNA (5103bp) protein (1701aa)
N-6 DNA methylase n=2 Tax=Oligotropha carboxidovorans RepID=B6JK28_OLICO rbh
putative DNA methylase rbh
Putative DNA methylase {ECO:0000313|EMBL:AEI08337.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_861_3
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6205..6603)
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK29_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08336.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_861_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6615..7214)
DNA (600bp) protein (200aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK30_OLICO rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG10576.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_861_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7576..8502)
DNA (927bp) protein (309aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=B6JK70_OLICO rbh
DNA primase (Bacterial type) {ECO:0000313|EMBL:CEG10574.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_861_6
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8702..8878)
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK71_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08333.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_861_7
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9391..10152
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MU0_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG61279.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_861_8
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10205..10879
DNA (675bp) protein (225aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK72_OLICO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI08330.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_861_9
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11047..11502
DNA (456bp) protein (152aa)
RES domain protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK73_OLICO
RES domain-containing protein
RES domain protein {ECO:0000313|EMBL:AEI08329.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_861_10
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11671..12294
DNA (624bp) protein (208aa)
Autoinducer synthase n=2 Tax=Oligotropha carboxidovorans RepID=B6JK74_OLICO
autoinducer synthase
Autoinducer synthase {ECO:0000313|EMBL:AEI08328.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_861_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12331..12576
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8N8G7_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS26862.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_861_12
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12704..13408)
DNA (705bp) protein (235aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK32_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig144, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53394.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_861_13
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13433..13999)
DNA (567bp) protein (189aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK33_OLICO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI08325.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_861_14
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14143..14814)
DNA (672bp) protein (224aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BR80_OLICM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI08324.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_861_15
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14825..15373)
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BR79_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08323.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_861_16
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15370..15993)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NZX9_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS32990.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
putative nuclease
scnpilot_solids2_trim150_scaffold_861_17
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15944..16282)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NUZ5_9BRAD
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
putative single-stranded DNA-binding protein
scnpilot_solids2_trim150_scaffold_861_18
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16308..16913)
DNA (606bp) protein (202aa)
Succinoglycan biosynthesis protein exoI-like n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFG3_NITHX
Bradyrhizobium elkanii strain UASWS1015 Contig134, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53752.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
succinoglycan biosynthesis protein exoI-like
scnpilot_solids2_trim150_scaffold_861_19
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16915..17415)
DNA (501bp) protein (167aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BR75_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08319.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_861_20
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17495..18235
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKX6_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS26853.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
putative lytic transglycosylase
scnpilot_solids2_trim150_scaffold_861_21
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18248..18550
DNA (303bp) protein (101aa)
Conjugal transfer protein, trbC n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFG6_NITHX
conjugal transfer protein, trbC; K03197 type IV secretion system protein VirB2
Conjugal transfer protein, trbC {ECO:0000313|EMBL:ABE65031.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
scnpilot_solids2_trim150_scaffold_861_22
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18547..18843
DNA (297bp) protein (99aa)
Conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK42_OLICO
Conjugal transfer protein {ECO:0000313|EMBL:KIZ46697.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
virB3; type IV secretion protein VirB3; K03198 type IV secretion system protein VirB3
scnpilot_solids2_trim150_scaffold_861_23
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18853..21264
DNA (2412bp) protein (804aa)
Type IV secretion protein VirB4 n=2 Tax=Oligotropha carboxidovorans RepID=B6JK43_OLICO
type IV secretion/conjugal transfer ATPase; K03199 type IV secretion system protein VirB4
Type IV secretion protein VirB4 {ECO:0000313|EMBL:AEI08315.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_861_24
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21261..22157
DNA (897bp) protein (299aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK44_OLICO
Uncharacterized protein {ECO:0000313|EMBL:KIZ46695.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_861_25
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22167..22877
DNA (711bp) protein (237aa)
Conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK45_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08313.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_861_26
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22894..23079
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE65026.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
scnpilot_solids2_trim150_scaffold_861_27
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23091..23270
DNA (180bp) protein (60aa)
Putative lipoprotein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JK47_OLICO
lipoprotein
Bradyrhizobium elkanii strain UASWS1015 Contig150, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53115.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
scnpilot_solids2_trim150_scaffold_861_28
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23279..24367
DNA (1089bp) protein (363aa)
TrbL/VirB6 plasmid conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK48_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig146, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53311.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
virB6; type IV secretion protein VirB6; K03201 type IV secretion system protein VirB6
scnpilot_solids2_trim150_scaffold_861_29
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24364..25080
DNA (717bp) protein (239aa)
VirB8 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH3_NITHX
VirB8; K03203 type IV secretion system protein VirB8
Bradyrhizobium elkanii strain UASWS1015 Contig150, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53117.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
scnpilot_solids2_trim150_scaffold_861_30
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25077..25880
DNA (804bp) protein (268aa)
Conjugal transfer protein TrbG/VirB9/CagX n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH4_NITHX
conjugal transfer protein TrbG/VirB9/CagX; K03204 type IV secretion system protein VirB9
Conjugal transfer protein TrbG/VirB9/CagX {ECO:0000313|EMBL:ABE65023.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Displaying items 1-30 of 52 in total

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