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scnpilot_solids2_trim150_scaffold_865

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_865_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..249
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NER0_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS26864.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
RES domain-containing protein
scnpilot_solids2_trim150_scaffold_865_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

417..1037
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKY6_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS26863.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
autoinducer synthase rbh
scnpilot_solids2_trim150_scaffold_865_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1083..1328
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8N8G7_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS26862.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_865_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1368..2081)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8ND77_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS26861.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_865_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2152..2727)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NH44_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS26860.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
scnpilot_solids2_trim150_scaffold_865_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2789..3268)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NEQ6_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS26859.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_865_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3465..4013)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKY1_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS26858.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_865_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4010..4600)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8N8G2_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS26857.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
putative nuclease
scnpilot_solids2_trim150_scaffold_865_9
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4587..4925)
DNA (339bp) protein (113aa)
Single-stranded DNA-binding protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8ND73_AFIFE
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070, ECO:0000256|RuleBase:RU000524}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
putative single-stranded DNA-binding protein
scnpilot_solids2_trim150_scaffold_865_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4938..5549)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NH39_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS26855.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_865_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5551..6048)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NEQ2_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS26854.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_865_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6147..6881
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKX6_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS26853.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
putative lytic transglycosylase
scnpilot_solids2_trim150_scaffold_865_13
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6895..7200
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8N8F8_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS26852.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
virB2; type IV secretion family protein VirB2; K03197 type IV secretion system protein VirB2
scnpilot_solids2_trim150_scaffold_865_14
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7197..7493
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8ND68_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS26851.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
virB3; type IV secretion protein VirB3; K03198 type IV secretion system protein VirB3
scnpilot_solids2_trim150_scaffold_865_15
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7503..9914
DNA (2412bp) protein (804aa)
Type IV secretion protein VirB4 n=2 Tax=Oligotropha carboxidovorans RepID=B6JK43_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig132, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53813.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
virB4; type IV secretion protein VirB4; K03199 type IV secretion system protein VirB4
scnpilot_solids2_trim150_scaffold_865_16
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9911..10807
DNA (897bp) protein (299aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK44_OLICO rbh
Bradyrhizobium elkanii strain UASWS1015 Contig132, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53812.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_865_17
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10818..11534
DNA (717bp) protein (239aa)
Conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK45_OLICO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI08313.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids2_trim150_scaffold_865_18
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11737..11931
DNA (195bp) protein (65aa)
Putative lipoprotein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JK47_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig146, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53312.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
lipoprotein
scnpilot_solids2_trim150_scaffold_865_19
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11940..13070
DNA (1131bp) protein (377aa)
TrbL/VirB6 plasmid conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK48_OLICO rbh
Bradyrhizobium elkanii strain UASWS1015 Contig146, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53311.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
virB6; type IV secretion protein VirB6; K03201 type IV secretion system protein VirB6 rbh
scnpilot_solids2_trim150_scaffold_865_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13067..13783
DNA (717bp) protein (239aa)
VirB8 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH3_NITHX rbh
VirB8; K03203 type IV secretion system protein VirB8 rbh
VirB8 {ECO:0000313|EMBL:ABE65024.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
scnpilot_solids2_trim150_scaffold_865_21
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13780..14583
DNA (804bp) protein (268aa)
Conjugal transfer protein TrbG/VirB9/CagX n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH4_NITHX rbh
conjugal transfer protein TrbG/VirB9/CagX; K03204 type IV secretion system protein VirB9 rbh
Conjugal transfer protein TrbG/VirB9/CagX {ECO:0000313|EMBL:ABE65023.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
scnpilot_solids2_trim150_scaffold_865_22
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14590..15936
DNA (1347bp) protein (449aa)
Conjugation TrbI-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH5_NITHX
conjugation TrbI-like protein; K03195 type IV secretion system protein VirB10
Conjugation TrbI-like protein {ECO:0000313|EMBL:ABE65022.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
scnpilot_solids2_trim150_scaffold_865_23
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15899..16957
DNA (1059bp) protein (353aa)
Type II secretion system protein E n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH6_NITHX
virB11; type IV secretion protein VirB11; K03196 type IV secretion system protein VirB11
Type II secretion system protein E {ECO:0000313|EMBL:ABE65021.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
scnpilot_solids2_trim150_scaffold_865_24
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16935..19094
DNA (2160bp) protein (720aa)
TRAG protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH7_NITHX rbh
TRAG protein; K03205 type IV secretion system protein VirD4 rbh
TRAG protein {ECO:0000313|EMBL:ABE65020.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
scnpilot_solids2_trim150_scaffold_865_25
Mesorhizobium sp. LNJC386A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19254..20357)
DNA (1104bp) protein (368aa)
UPI0003CE48F4 related cluster n=1 Tax=unknown RepID=UPI0003CE48F4 rbh
Appr-1-p processing protein {ECO:0000313|EMBL:ESY38402.1}; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_865_26
Mesorhizobium sp. LNJC386A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20368..21015)
DNA (648bp) protein (216aa)
UPI0003CF079B related cluster n=1 Tax=unknown RepID=UPI0003CF079B
Uncharacterized protein {ECO:0000313|EMBL:ESY38403.1}; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_865_27
unknown

Not on your lists

comp(21012..21155)
DNA (144bp) protein (48aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_865_28
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21487..22038)
DNA (552bp) protein (184aa)
Major facilitator superfamily MFS_1 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH9_NITHX
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABE65018.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
scnpilot_solids2_trim150_scaffold_865_29
unknown

Not on your lists

22266..22976
DNA (711bp) protein (237aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_865_30
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23170..23490)
DNA (321bp) protein (107aa)
Putative transcriptional regulator, ArsR family n=2 Tax=Oligotropha carboxidovorans RepID=F8BR25_OLICM
ArsR family transcriptional regulator {ECO:0000313|EMBL:KIZ46685.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
ArsR family transcriptional regulator
Displaying items 1-30 of 32 in total

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