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scnpilot_solids2_trim150_scaffold_873

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_873_1
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2..553
DNA (552bp) protein (184aa)
Type IV secretory pathway VirD4 components-like protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJN9_ZUNPS
type IV secretory pathway VirD4 components-like protein
Type IV secretory pathway VirD4 components-like protein {ECO:0000313|EMBL:ADF53737.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
scnpilot_solids2_trim150_scaffold_873_2
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

574..825
DNA (252bp) protein (84aa)
Type IV secretory pathway VirD4 components-like protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJN9_ZUNPS
type IV secretory pathway VirD4 components-like protein
Type IV secretory pathway VirD4 components-like protein {ECO:0000313|EMBL:ADF53737.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
scnpilot_solids2_trim150_scaffold_873_3
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(843..1370)
DNA (528bp) protein (176aa)
Flavodoxin n=1 Tax=Joostella marina DSM 19592 RepID=I3CA86_9FLAO
Flavodoxin {ECO:0000313|EMBL:KIA84092.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
flavodoxin
scnpilot_solids2_trim150_scaffold_873_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1502..3253)
DNA (1752bp) protein (584aa)
L-sorbosone dehydrogenase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SDT3_RHOMR rbh
L-sorbosone dehydrogenase rbh
L-sorbosone dehydrogenase {ECO:0000313|EMBL:AEN72453.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
scnpilot_solids2_trim150_scaffold_873_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3300..4343)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI000364E5D9 rbh
SMP-30/Gluconolaconase/LRE-like region-containing protein {ECO:0000313|EMBL:AHG89801.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
SMP-30/gluconolaconase/LRE-like region rbh
scnpilot_solids2_trim150_scaffold_873_6
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4367..4729)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B30D32
hypothetical protein
Tax=BJP_08E140C01_Flavobacteriales_35_8
scnpilot_solids2_trim150_scaffold_873_7
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4736..4882)
DNA (147bp) protein (49aa)
Tax=BJP_08E140C01_Flavobacteriales_35_8
scnpilot_solids2_trim150_scaffold_873_8
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4936..5811)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029B0CE3
Uncharacterized protein {ECO:0000313|EMBL:EDM37959.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_873_9
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6036..7022)
DNA (987bp) protein (329aa)
Pyridoxine 4-dehydrogenase (EC:1.1.1.65) rbh
Pyridoxine 4-dehydrogenase {ECO:0000313|EMBL:AEI46905.1}; EC=1.1.1.65 {ECO:0000313|EMBL:AEI46905.1};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
aldehyde oxidase n=1 Tax=Spirosoma panaciterrae RepID=UPI00037AB056 rbh
scnpilot_solids2_trim150_scaffold_873_10
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

7189..8385
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z790_BELBD
hypothetical protein
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
scnpilot_solids2_trim150_scaffold_873_11
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

8393..8977
DNA (585bp) protein (195aa)
Uncharacterized protein id=1747069 bin=GWD2_Bacteroidales_45_23 species=Belliella baltica genus=Belliella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
scnpilot_solids2_trim150_scaffold_873_12
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

8961..12617
DNA (3657bp) protein (1219aa)
Uncharacterized protein n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z788_BELBD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_873_13
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

12614..13462
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AKJ6_FLELS
hypothetical protein
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
scnpilot_solids2_trim150_scaffold_873_14
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13590..14351)
DNA (762bp) protein (254aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH74_NIAKG rbh
Contig33, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77526.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
LytTR family two component transcriptional regulator rbh
scnpilot_solids2_trim150_scaffold_873_15
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14332..15369)
DNA (1038bp) protein (346aa)
Putative signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH73_NIAKG rbh
Histidine kinase {ECO:0000313|EMBL:KIA93598.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
putative signal transduction histidine kinase rbh
scnpilot_solids2_trim150_scaffold_873_16
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16031..18499
DNA (2469bp) protein (823aa)
TonB-dependent receptor n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PE29_CHIPD
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ACU61529.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_873_17
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18888..19799
DNA (912bp) protein (304aa)
Death-on-curing family protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L3S1_HALH1 rbh
death-on-curing family protein rbh
Death-on-curing family protein {ECO:0000313|EMBL:AEE48675.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_873_18
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19821..21425)
DNA (1605bp) protein (535aa)
carboxylesterase; K03929 para-nitrobenzyl esterase [EC:3.1.1.-] rbh
Carboxylic ester hydrolase; EC=3.1.1.-;; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI0003715CB8 rbh
scnpilot_solids2_trim150_scaffold_873_19
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21621..22520
DNA (900bp) protein (300aa)
transcriptional regulator n=1 Tax=Segetibacter koreensis RepID=UPI00035DAC42 rbh
Transcriptional regulator {ECO:0000313|EMBL:KIC94265.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
transcriptional regulator rbh
scnpilot_solids2_trim150_scaffold_873_20
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23079..23468
DNA (390bp) protein (130aa)
Single-stranded DNA-binding protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FS13_9SPHI
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070, ECO:0000256|RuleBase:RU000524}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
single stranded DNA-binding protein
scnpilot_solids2_trim150_scaffold_873_21
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23510..24499
DNA (990bp) protein (330aa)
Phage/plasmid-related protein TIGR03299 n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W147_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE64173.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
phage/plasmid-like protein
scnpilot_solids2_trim150_scaffold_873_22
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25421..25972
DNA (552bp) protein (184aa)
putative transcriptional regulator; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
Uncharacterized protein n=1 Tax=Prevotella stercorea CAG:629 RepID=R7H793_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KGO80766.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
Displaying 22 items

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