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scnpilot_solids2_trim150_scaffold_880

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_880_1
unknown

Not on your lists

comp(145..354)
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_880_2
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(386..1126)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7P7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KDA04531.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids2_trim150_scaffold_880_3
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1145..1660)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349F2D6
Uncharacterized protein {ECO:0000313|EMBL:KDA04532.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids2_trim150_scaffold_880_4
unknown

Not on your lists

comp(1673..1825)
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_880_5
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1981..2562)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7P9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KDA04533.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
5'-terminal protein
scnpilot_solids2_trim150_scaffold_880_6
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2562..7700)
DNA (5139bp) protein (1713aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7Q0_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EIC06994.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
telomere-associated protein rbh
scnpilot_solids2_trim150_scaffold_880_7
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8724..9785)
DNA (1062bp) protein (354aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA04537.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids2_trim150_scaffold_880_8
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10029..10463
DNA (435bp) protein (145aa)
DNA repair protein n=1 Tax=Microbacterium paraoxydans RepID=UPI00036B69D0
SPG23_c28, whole genome shotgun sequence {ECO:0000313|EMBL:KIS25754.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
UmuD-like protein
scnpilot_solids2_trim150_scaffold_880_9
unknown

Not on your lists

10464..10601
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_880_10
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11051..11416)
DNA (366bp) protein (122aa)
DNA-directed RNA polymerase, sigma subunit (Sigma70/sigma32) n=2 Tax=Microbacterium RepID=H8E3L4_9MICO
von Willebrand factor A {ECO:0000313|EMBL:KIC59116.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
scnpilot_solids2_trim150_scaffold_880_11
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11608..12312)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000305324C rbh
Uncharacterized protein {ECO:0000313|EMBL:ERG64465.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
TetR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_880_12
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12526..13191
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003648F31
Uncharacterized protein {ECO:0000313|EMBL:KGM01261.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_880_13
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13258..14064
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Arthrobacter sp. TB 23 RepID=UPI0002E2EC58
Stress response protein YsnF {ECO:0000313|EMBL:KJL21299.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_880_14
Gordonia paraffinivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14286..15779
DNA (1494bp) protein (498aa)
Putative transposase n=1 Tax=Gordonia paraffinivorans NBRC 108238 RepID=M3VGV3_9ACTO rbh
Putative transposase {ECO:0000313|EMBL:GAC86318.1}; TaxID=1223543 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia paraffinivorans NBRC 108238.;"
TnpB family transposase rbh
scnpilot_solids2_trim150_scaffold_880_15
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15815..16114
DNA (300bp) protein (100aa)
cation transporter n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00036BA344
Cation transporter {ECO:0000313|EMBL:EYT55080.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
cation diffusion facilitator family transporter; K03295 cation efflux system protein, CDF family
scnpilot_solids2_trim150_scaffold_880_16
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16402..17883)
DNA (1482bp) protein (494aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
NADH dehydrogenase (quinone) (EC:1.6.99.5); K05903 NADH dehydrogenase (quinone) [EC:1.6.99.5] rbh
NADH-quinone oxidoreductase subunit N n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WXD3_9ACTO rbh
scnpilot_solids2_trim150_scaffold_880_17
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17891..19375)
DNA (1485bp) protein (495aa)
proton-translocating NADH-quinone oxidoreductase, chain M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit M n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6V4V0_9ACTO rbh
NADH-quinone oxidoreductase subunit M {ECO:0000313|EMBL:GAB91213.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
scnpilot_solids2_trim150_scaffold_880_18
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19378..21204)
DNA (1827bp) protein (609aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5); K05903 NADH dehydrogenase (quinone) [EC:1.6.99.5] rbh
NADH-quinone oxidoreductase subunit L n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WGB0_9ACTO rbh
NADH-quinone oxidoreductase subunit L {ECO:0000313|EMBL:GAB91212.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
scnpilot_solids2_trim150_scaffold_880_19
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21201..21503)
DNA (303bp) protein (101aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit K n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WBT4_9ACTO
scnpilot_solids2_trim150_scaffold_880_20
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21500..22060)
DNA (561bp) protein (187aa)
NADH:ubiquinone oxidoreductase subunit 6 (chain J) (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit J n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6VWC3_9ACTO rbh
NADH-quinone oxidoreductase subunit J {ECO:0000313|EMBL:GAB91210.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
scnpilot_solids2_trim150_scaffold_880_21
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22057..22995)
DNA (939bp) protein (313aa)
NADH-quinone oxidoreductase subunit H n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WXC8_9ACTO rbh
NADH-quinone oxidoreductase subunit H {ECO:0000313|EMBL:GAB91209.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
respiratory-chain NADH dehydrogenase subunit 1 rbh
scnpilot_solids2_trim150_scaffold_880_22
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22988..23908)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6V4U7_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:GAB91208.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
hypothetical protein
Displaying 22 items

View Taxonomy