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scnpilot_solids2_trim150_scaffold_882

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_882_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..355
DNA (354bp) protein (118aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU44_9GAMM
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter {ECO:0000313|EMBL:EIL90735.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
scnpilot_solids2_trim150_scaffold_882_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

355..1914
DNA (1560bp) protein (520aa)
NodT family efflux transporter outer membrane lipoprotein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU45_9GAMM rbh
NodT family efflux transporter outer membrane lipoprotein {ECO:0000313|EMBL:EIL90736.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
efflux transporter, outer membrane factor lipoprotein, NodT family
scnpilot_solids2_trim150_scaffold_882_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1911..2651
DNA (741bp) protein (247aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU46_9GAMM rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EIL90737.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
short-chain dehydrogenase of unknown substrate specificity
scnpilot_solids2_trim150_scaffold_882_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2879..3376)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU47_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL90738.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_882_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3659..4858
DNA (1200bp) protein (400aa)
Peptidase M23 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU48_9GAMM rbh
Peptidase M23 {ECO:0000313|EMBL:EIL90739.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
peptidase M23
scnpilot_solids2_trim150_scaffold_882_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5328..6413
DNA (1086bp) protein (362aa)
Signal transduction histidine kinase LytS n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU49_9GAMM rbh
Signal transduction histidine kinase LytS {ECO:0000313|EMBL:EIL90740.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
signal transduction histidine kinase LytS
scnpilot_solids2_trim150_scaffold_882_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6410..7165
DNA (756bp) protein (252aa)
LytTR family two component transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU50_9GAMM rbh
LytTR family two component transcriptional regulator {ECO:0000313|EMBL:EIL90741.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
LytTR family two component transcriptional regulator; K02477 two-component system, LytT family, response regulator
scnpilot_solids2_trim150_scaffold_882_8
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7618..8619)
DNA (1002bp) protein (334aa)
alcohol dehydrogenase; K00001 alcohol dehydrogenase [EC:1.1.1.1] rbh
Alcohol dehydrogenase, zinc-binding domain protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VLS8_POLNA rbh
Alcohol dehydrogenase, zinc-binding domain protein {ECO:0000313|EMBL:ABM36606.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
scnpilot_solids2_trim150_scaffold_882_9
Burkholderia phytofirmans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8616..9458)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI0003796A98 rbh
short chain dehydrogenase rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACD16456.1}; Flags: Precursor;; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phytofirmans (strain DSM 17436 / PsJN).;"
scnpilot_solids2_trim150_scaffold_882_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9609..10214)
DNA (606bp) protein (202aa)
TetR family transcriptional regulator n=1 Tax=Thiomonas sp. FB-6 RepID=UPI0003730F5C
Uncharacterized protein {ECO:0000313|EMBL:EPD42817.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
TetR family transcriptional regulator
scnpilot_solids2_trim150_scaffold_882_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10668..11681
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU59_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL90750.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
periplasmic component of the Tol biopolymer transport system
scnpilot_solids2_trim150_scaffold_882_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11668..12639
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU60_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL90751.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
periplasmic component of the Tol biopolymer transport system
scnpilot_solids2_trim150_scaffold_882_13
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12700..13515
DNA (816bp) protein (272aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1XZA0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:GAN44961.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
scnpilot_solids2_trim150_scaffold_882_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13537..14724)
DNA (1188bp) protein (396aa)
Putative permease n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU61_9GAMM rbh
Putative permease {ECO:0000313|EMBL:EIL90752.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative permease rbh
scnpilot_solids2_trim150_scaffold_882_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14721..15047)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU62_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90753.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_882_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15044..15544)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU63_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL90754.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_882_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15541..15903)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU64_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90755.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_882_18
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15958..16113)
DNA (156bp) protein (52aa)
UPF0391 membrane protein UU7_14990 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU65_9GAMM
Protein of unknown function (DUF1328)
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_882_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16251..16874)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU66_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL90757.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phospholipid-binding protein, PBP family
scnpilot_solids2_trim150_scaffold_882_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16947..18035)
DNA (1089bp) protein (363aa)
L-sorbosone dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU67_9GAMM rbh
L-sorbosone dehydrogenase {ECO:0000313|EMBL:EIL90758.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glucose/sorbosone dehydrogenase
scnpilot_solids2_trim150_scaffold_882_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18135..19610
DNA (1476bp) protein (492aa)
ATPase AAA n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU68_9GAMM rbh
ATPase AAA {ECO:0000313|EMBL:EIL90759.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
AAA+ family ATPase rbh
scnpilot_solids2_trim150_scaffold_882_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19722..19934
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU70_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90761.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_882_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20048..20659
DNA (612bp) protein (204aa)
2OG-Fe(II) oxygenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU71_9GAMM rbh
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:EIL90762.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative proline hydroxylase
scnpilot_solids2_trim150_scaffold_882_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20632..21690)
DNA (1059bp) protein (353aa)
Putative hydrolase of the alpha/beta-hydrolase fold protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU72_9GAMM rbh
Putative hydrolase of the alpha/beta-hydrolase fold protein {ECO:0000313|EMBL:EIL90763.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative hydrolase of the alpha/beta-hydrolase fold protein
scnpilot_solids2_trim150_scaffold_882_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21687..22487)
DNA (801bp) protein (267aa)
Acetyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU73_9GAMM rbh
Acetyltransferase {ECO:0000313|EMBL:EIL90764.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase
scnpilot_solids2_trim150_scaffold_882_26
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22506..23006)
DNA (501bp) protein (167aa)
AsnC family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU74_9GAMM rbh
AsnC family transcriptional regulator {ECO:0000313|EMBL:EIL90765.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_882_27
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23142..23867
DNA (726bp) protein (242aa)
Phenylalanine 4-monooxygenase {ECO:0000313|EMBL:EIL90766.1}; EC=1.14.16.1 {ECO:0000313|EMBL:EIL90766.1};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Phenylalanine 4-hydroxylase (EC:1.14.16.1)
Phenylalanine 4-monooxygenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU75_9GAMM
Displaying 27 items

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