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scnpilot_solids2_trim150_scaffold_894

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_894_1
unknown

Not on your lists

comp(65..883)
DNA (819bp) protein (273aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_894_2
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(899..1615)
DNA (717bp) protein (239aa)
UPI0003D6032F related cluster n=1 Tax=unknown RepID=UPI0003D6032F
Uncharacterized protein {ECO:0000313|EMBL:KIJ80174.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
succinoglycan biosynthesis protein
scnpilot_solids2_trim150_scaffold_894_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1843..2901
DNA (1059bp) protein (353aa)
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids2_trim150_scaffold_894_4
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2906..3700)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000301DE97
Outer membrane stress sensor protease DegS {ECO:0000313|EMBL:EWC61624.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
peptidase S1 and S6 chymotrypsin/Hap
scnpilot_solids2_trim150_scaffold_894_5
Rhizobium phage RR1-A, Caudovirales, Viruses

Not on your lists

comp(3697..3978)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Rhizobium phage RR1-A RepID=R9TN97_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AGN34413.1}; TaxID=929833 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Rhizobium phage RR1-A.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_894_6
BJP_IG2102_Desulfovibrionales_64_25, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3983..4306)
DNA (324bp) protein (108aa)
Tax=BJP_IG2102_Desulfovibrionales_64_25
scnpilot_solids2_trim150_scaffold_894_7
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4531..5727)
DNA (1197bp) protein (399aa)
ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
ATP-dependent DNA ligase-like domain protein n=1 Tax=Leptospira weilii str. UI 13098 RepID=M6QM94_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:KIL03168.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
scnpilot_solids2_trim150_scaffold_894_8

Not on your lists

comp(5882..6661)
DNA (780bp) protein (260aa)
UBA/THIF-type NAD/FAD binding fold protein n=2 Tax=mine drainage metagenome RepID=T1BGZ2_9ZZZZ
UBA/THIF-type NAD/FAD binding fold protein {ECO:0000313|EMBL:EQD67883.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
PRTRC system ThiF family protein
scnpilot_solids2_trim150_scaffold_894_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6658..7290)
DNA (633bp) protein (211aa)
PRTRC system protein A n=1 Tax=Rhodanobacter denitrificans RepID=M4NHD0_9GAMM
PRTRC system protein A
PRTRC system protein A {ECO:0000313|EMBL:AGG89048.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_894_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7290..8030)
DNA (741bp) protein (247aa)
PRTRC system protein B n=1 Tax=Rhodanobacter denitrificans RepID=M4NG49_9GAMM
PRTRC system protein B
PRTRC system protein B {ECO:0000313|EMBL:AGG89047.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_894_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8023..9381)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NMY6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89046.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_894_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9452..9871)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NE84_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89044.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_894_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9885..10409)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NHC7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89043.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_894_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10447..10923)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NE47_9GAMM
Protein of unknown function (DUF3085)
Uncharacterized protein {ECO:0000313|EMBL:AGG89050.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_894_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10997..12781)
DNA (1785bp) protein (595aa)
PRTRC system ParB family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NG45_9GAMM rbh
PRTRC system ParB family protein rbh
PRTRC system ParB family protein {ECO:0000313|EMBL:AGG89042.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_894_16
unknown

Not on your lists

comp(13136..13240)
DNA (105bp) protein (35aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_894_17
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14420..15763)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=I6SSI0_PSEAI
hypothetical protein
Wall-associated protein {ECO:0000313|EMBL:ETD46148.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
scnpilot_solids2_trim150_scaffold_894_18
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16366..17502)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa 18A RepID=M1Z2E4_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:CDH80220.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MH27.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_894_19
Xanthomonas hortorum, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17453..21154)
DNA (3702bp) protein (1234aa)
RhsD protein n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7ZCP0_9XANT rbh
RhsD protein {ECO:0000313|EMBL:ETC87753.1}; TaxID=863365 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas hortorum pv. carotae str. M081.;"
rhsA; Rhs family protein rbh
scnpilot_solids2_trim150_scaffold_894_20
unknown

Not on your lists

comp(21268..21534)
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_894_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21527..24655)
DNA (3129bp) protein (1043aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI000381EC88 rbh
helZ1; helicase superfamily protein II rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids2_trim150_scaffold_894_22
unknown

Not on your lists

comp(24752..25102)
DNA (351bp) protein (117aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_894_23
unknown

Not on your lists

comp(25184..26017)
DNA (834bp) protein (278aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_894_24
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26098..27111)
DNA (1014bp) protein (338aa)
GTP-binding protein n=1 Tax=Thioalkalivibrio RepID=UPI00036EB293
hypothetical protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
scnpilot_solids2_trim150_scaffold_894_25
Chromohalobacter salexigens, Chromohalobacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27135..28247)
DNA (1113bp) protein (371aa)
DNA polymerase III subunit beta; K02338 DNA polymerase III subunit beta [EC:2.7.7.7]
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=290398 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Chromohalobacter.;" source="Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB; 13768).;"
DNA polymerase III subunit beta n=1 Tax=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) RepID=Q1R1P1_CHRSD
scnpilot_solids2_trim150_scaffold_894_26
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28365..29528)
DNA (1164bp) protein (388aa)
glutathionylspermidine synthase n=1 Tax=Rudaea cellulosilytica RepID=UPI0003800E7D rbh
glutathionylspermidine synthase
Glutathionylspermidine synthase {ECO:0000313|EMBL:ACF53548.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
scnpilot_solids2_trim150_scaffold_894_27
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29531..30094)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VPY5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89276.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative integral membrane protein
scnpilot_solids2_trim150_scaffold_894_28
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30114..30767)
DNA (654bp) protein (218aa)
hypothetical protein n=2 Tax=Xanthomonas RepID=UPI000301E680
Uncharacterized protein {ECO:0000313|EMBL:EYR66285.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_894_29
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30832..31530)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002D42197
PspA-IM30 family protein {ECO:0000313|EMBL:KHD64713.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. phaseoli.;"
PspA/IM30 family protein
scnpilot_solids2_trim150_scaffold_894_30
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31540..32160)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000377F788
Uncharacterized protein {ECO:0000313|EMBL:GAD63066.1}; TaxID=1215092 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes NBRC 14159.;"
hypothetical protein; K09980 hypothetical protein
Displaying items 1-30 of 45 in total

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