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scnpilot_solids2_trim150_scaffold_897

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_897_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..773
DNA (771bp) protein (257aa)
Outer membrane cobalamin receptor protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVL8_9GAMM
Outer membrane cobalamin receptor protein {ECO:0000313|EMBL:EIL91259.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
outer membrane receptor for ferrienterochelin and colicins
scnpilot_solids2_trim150_scaffold_897_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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884..2746
DNA (1863bp) protein (621aa)
Sulfotransferase family protein n=4 Tax=Rhodanobacter denitrificans RepID=M4NDP4_9GAMM
sulfotransferase family protein
Sulfotransferase family protein {ECO:0000313|EMBL:AGG87578.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_897_3
Pseudomonas sp. St29, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2899..3588)
DNA (690bp) protein (230aa)
KDP operon transcriptional regulatory protein KdpE n=3 Tax=Pseudomonas RepID=J0PV24_9PSED rbh
DNA-binding response regulator KdpE {ECO:0000313|EMBL:BAQ82522.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;"
kdpE_2; KDP operon transcriptional regulatory protein KdpE; K07667 two-component system, OmpR family, KDP operon response regulator KdpE rbh
scnpilot_solids2_trim150_scaffold_897_4
Pseudomonas sp. TKP, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3585..6236)
DNA (2652bp) protein (884aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1415630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. TKP.;"
kdpD_2; sensor histidine kinase KdpD; K07646 two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
UPI0003D5A25D related cluster n=1 Tax=unknown RepID=UPI0003D5A25D
scnpilot_solids2_trim150_scaffold_897_5
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6233..6832)
DNA (600bp) protein (200aa)
potassium-transporting ATPase subunit C n=1 Tax=Acidovorax radicis RepID=UPI00023785E2
K+-transporting ATPase C
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_solids2_trim150_scaffold_897_6
unknown

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comp(6842..7144)
DNA (303bp) protein (101aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_897_7
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7154..9217)
DNA (2064bp) protein (688aa)
Potassium-transporting ATPase B chain; K01547 K+-transporting ATPase ATPase B chain [EC:3.6.3.12] rbh
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (
Potassium-transporting ATPase B chain n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GKK4_NITSI rbh
scnpilot_solids2_trim150_scaffold_897_8
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9232..10929)
DNA (1698bp) protein (566aa)
atkA; AtkA (EC:3.6.3.12); K01546 K+-transporting ATPase ATPase A chain [EC:3.6.3.12]
Potassium-transporting ATPase A chain n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=ATKA_LARHH
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
scnpilot_solids2_trim150_scaffold_897_9
unknown

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comp(10926..11030)
DNA (105bp) protein (35aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_897_10
unknown

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comp(11020..11118)
DNA (99bp) protein (33aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_897_11
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11335..12012)
DNA (678bp) protein (226aa)
Putative membrane protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L4W1_FRAAD
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AFC85034.1}; Flags: Precursor;; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
scnpilot_solids2_trim150_scaffold_897_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12547..13632
DNA (1086bp) protein (362aa)
undecaprenylphosphate N-acetylglucosamine 1-phosphate transferase; K02851 UDP-GlcNAc:undecaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33]
UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVB3_9GAMM
UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase {ECO:0000313|EMBL:EIL91154.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_897_13
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13828..14439)
DNA (612bp) protein (204aa)
Acetyltransferase n=2 Tax=Escherichia coli RepID=I4UN24_ECOLX
acetyltransferase
Acetyltransferase (Isoleucine patch superfamily) {ECO:0000313|EMBL:ABC29520.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2396).;"
scnpilot_solids2_trim150_scaffold_897_14
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14436..15617)
DNA (1182bp) protein (394aa)
Glycosyl transferase n=1 Tax=Burkholderia sp. YI23 RepID=G8MI29_9BURK
Glycosyl transferase family protein {ECO:0000313|EMBL:KGQ19839.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
glycosyl transferase family protein
scnpilot_solids2_trim150_scaffold_897_15
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15622..16773)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LBC8_ACEWD
Uncharacterized protein {ECO:0000313|EMBL:KGQ19836.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_897_16
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16770..18227)
DNA (1458bp) protein (486aa)
Uncharacterized protein {ECO:0000313|EMBL:KGQ19833.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
scnpilot_solids2_trim150_scaffold_897_17
unknown

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comp(18244..19290)
DNA (1047bp) protein (349aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_897_18

Not on your lists

comp(19294..20163)
DNA (870bp) protein (290aa)
Glycosyl transferase family 2 n=1 Tax=uncultured bacterium RepID=K2DFR6_9BACT
Glycosyl transferase family 2 {ECO:0000313|EMBL:EKD96957.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
cell wall biogenesis glycosyltransferase
scnpilot_solids2_trim150_scaffold_897_19
Vibrio metschnikovii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20160..21332)
DNA (1173bp) protein (391aa)
Putative polysaccharide pyruvyl transferase n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P8S0_VIBME
Putative polysaccharide pyruvyl transferase {ECO:0000313|EMBL:EEX35765.1}; TaxID=675813 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio metschnikovii CIP 69.14.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_897_20
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21329..22669)
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI00036E6828 rbh
Membrane protein {ECO:0000313|EMBL:KGQ19837.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
polysaccharide biosynthesis protein rbh
scnpilot_solids2_trim150_scaffold_897_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22681..23466)
DNA (786bp) protein (262aa)
Nucleotide sugar dehydrogenase n=1 Tax=Rhodanobacter denitrificans RepID=M4NEX0_9GAMM
nucleotide sugar dehydrogenase
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:AGG89354.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 21 items

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