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scnpilot_solids2_trim150_scaffold_903

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_903_1
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2..178
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JXZ0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR72509.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
scnpilot_solids2_trim150_scaffold_903_2
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(358..1197)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000367289D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK02826.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
scnpilot_solids2_trim150_scaffold_903_3
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1224..2051)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037E0832
Uncharacterized protein {ECO:0000313|EMBL:KIC91723.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein; K09134 hypothetical protein
scnpilot_solids2_trim150_scaffold_903_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(2113..2913)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000371B5E7
3-oxoacyl-(acyl-carrier-protein) reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_903_5
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3067..4254)
DNA (1188bp) protein (396aa)
Major facilitator superfamily MFS_1 n=2 Tax=Myroides RepID=H1ZBS8_MYROD rbh
major facilitator superfamily protein; K03449 MFS transporter, CP family, cyanate transporter rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADY51209.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
scnpilot_solids2_trim150_scaffold_903_6
unknown

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comp(4305..4559)
DNA (255bp) protein (85aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_903_7
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4622..4927)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EFF8_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI48304.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids2_trim150_scaffold_903_8
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5229..5882
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B71DCF
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACU59083.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_903_9
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5934..7040
DNA (1107bp) protein (369aa)
anti-FecI sigma factor FecR n=1 Tax=Cytophagales str. B6 RepID=UPI0003B362AD rbh
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ACU64583.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_903_10
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7291..10602
DNA (3312bp) protein (1104aa)
TonB-dependent receptor plug n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFC8_CHIPD rbh
Putative TonB-dependent receptor {ECO:0000313|EMBL:GAO41135.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
TonB-dependent receptor plug rbh
scnpilot_solids2_trim150_scaffold_903_11
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10615..12225
DNA (1611bp) protein (537aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6E976_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO41134.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
RagB/SusD domain-containing protein rbh
scnpilot_solids2_trim150_scaffold_903_12
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12280..13146
DNA (867bp) protein (289aa)
Cell surface protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6E977_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO41133.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
PKD domain-containing protein rbh
scnpilot_solids2_trim150_scaffold_903_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13599..14792
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NJT9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF14106.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_903_14
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14797..15732
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000369AD44 rbh
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_solids2_trim150_scaffold_903_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15860..16447
DNA (588bp) protein (196aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niabella soli DSM 19437 RepID=H1NRR7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17794.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
sigma-70 family RNA polymerase sigma factor
scnpilot_solids2_trim150_scaffold_903_16
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17065..18156
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HHK7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ETZ21429.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
anti-FecI sigma factor FecR
scnpilot_solids2_trim150_scaffold_903_17
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18254..21724
DNA (3471bp) protein (1157aa)
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K0S0_9BACE rbh
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:EFI40319.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_903_18
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23412..23594
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 RepID=U6RFM7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA53983.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_903_19
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23615..24844
DNA (1230bp) protein (410aa)
Uncharacterized protein id=3725193 bin=GWF2_Bacteroidetes_49_14 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
hypothetical protein
Tax=GWF2_Bacteroidetes_49_14_curated
scnpilot_solids2_trim150_scaffold_903_20
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24998..25735
DNA (738bp) protein (246aa)
hypothetical protein; K05970 sialate O-acetylesterase [EC:3.1.1.53]
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QK09_SPILD
Uncharacterized protein {ECO:0000313|EMBL:AKD58615.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
Displaying 20 items

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